Gene : Phvul.006G205400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR32332:SF20 - 2-NITROPROPANE DIOXYGENASE-LIKE PROTEIN Genomic Order:  2068
Name:  ? Phvul.006G205400 Secondary Identifier:  ? PAC:37173330
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris FASYN-ELONG-PWY Phaseolus vulgaris pathologic  
Pvulgaris PWY-5156 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5971 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5973 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5989 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6282 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7663 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G205400 0.5kb upstream 0.5kb upstream 3687 true Chr06: 30052653-30056339 Phaseolus vulgaris
Phvul.006G205400 0.5kb upstream 0.5kb upstream 500 false Chr06: 30052653-30053152 Phaseolus vulgaris
Phvul.006G205400 0.5kb downstream 0.5kb downstream 3687 true Chr06: 30053153-30056839 Phaseolus vulgaris
Phvul.006G205400 0.5kb downstream 0.5kb downstream 500 false Chr06: 30056340-30056839 Phaseolus vulgaris
Phvul.006G205400 1.0kb upstream 1.0kb upstream 4187 true Chr06: 30052153-30056339 Phaseolus vulgaris
Phvul.006G205400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 30052153-30053152 Phaseolus vulgaris
Phvul.006G205400 1.0kb downstream 1.0kb downstream 4187 true Chr06: 30053153-30057339 Phaseolus vulgaris
Phvul.006G205400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 30056340-30057339 Phaseolus vulgaris
Phvul.006G205400 2.0kb upstream 2.0kb upstream 5187 true Chr06: 30051153-30056339 Phaseolus vulgaris
Phvul.006G205400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 30051153-30053152 Phaseolus vulgaris
Phvul.006G205400 2.0kb downstream 2.0kb downstream 5187 true Chr06: 30053153-30058339 Phaseolus vulgaris
Phvul.006G205400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 30056340-30058339 Phaseolus vulgaris
Phvul.006G205400 5.0kb upstream 5.0kb upstream 8187 true Chr06: 30048153-30056339 Phaseolus vulgaris
Phvul.006G205400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 30048153-30053152 Phaseolus vulgaris
Phvul.006G205400 5.0kb downstream 5.0kb downstream 8187 true Chr06: 30053153-30061339 Phaseolus vulgaris
Phvul.006G205400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 30056340-30061339 Phaseolus vulgaris
Phvul.006G205400 10.0kb upstream 10.0kb upstream 13187 true Chr06: 30043153-30056339 Phaseolus vulgaris
Phvul.006G205400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 30043153-30053152 Phaseolus vulgaris
Phvul.006G205400 10.0kb downstream 10.0kb downstream 13187 true Chr06: 30053153-30066339 Phaseolus vulgaris
Phvul.006G205400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 30056340-30066339 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301256 5265 Fabidae View MSA
124063505 5270 Rosid View MSA
123738434 5271 Pentapetalae View MSA
122788741 5272 Eudicot View MSA
122044198 5273 Angiosperm View MSA
121347483 5274 Embryophyte View MSA
123428183 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 97.1195 0.0 460.469 High High
cufflinks 73.3941 0.0 327.211 High High
cufflinks 7.97856 0.0 35.0668   Low
cufflinks 18.1309 0.0 72.9909    
cufflinks 7.34746 0.0 33.565   Low
cufflinks 6.4488 0.0 32.3434   Low
cufflinks 34.1303 0.0 129.633 High  
cufflinks 21.0943 0.0 90.0758    
cufflinks 29.9356 0.0 116.738    
cufflinks 38.3746 0.0 159.774 High  
cufflinks 8.48688 0.0 32.8163    

0 Strain