Gene : Phvul.006G209300 P. vulgaris v2.1
Defline:  (1 of 2) 4.1.1.22 - Histidine decarboxylase / L-histidine carboxy-lyase Genomic Order:  2109
Name:  ? Phvul.006G209300 Secondary Identifier:  ? PAC:37171384
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G209300 0.5kb upstream 0.5kb upstream 4857 true Chr06: 30334822-30339678 Phaseolus vulgaris
Phvul.006G209300 0.5kb upstream 0.5kb upstream 500 false Chr06: 30334822-30335321 Phaseolus vulgaris
Phvul.006G209300 0.5kb downstream 0.5kb downstream 4857 true Chr06: 30335322-30340178 Phaseolus vulgaris
Phvul.006G209300 0.5kb downstream 0.5kb downstream 500 false Chr06: 30339679-30340178 Phaseolus vulgaris
Phvul.006G209300 1.0kb upstream 1.0kb upstream 5357 true Chr06: 30334322-30339678 Phaseolus vulgaris
Phvul.006G209300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 30334322-30335321 Phaseolus vulgaris
Phvul.006G209300 1.0kb downstream 1.0kb downstream 5357 true Chr06: 30335322-30340678 Phaseolus vulgaris
Phvul.006G209300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 30339679-30340678 Phaseolus vulgaris
Phvul.006G209300 2.0kb upstream 2.0kb upstream 6357 true Chr06: 30333322-30339678 Phaseolus vulgaris
Phvul.006G209300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 30333322-30335321 Phaseolus vulgaris
Phvul.006G209300 2.0kb downstream 2.0kb downstream 6357 true Chr06: 30335322-30341678 Phaseolus vulgaris
Phvul.006G209300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 30339679-30341678 Phaseolus vulgaris
Phvul.006G209300 5.0kb upstream 5.0kb upstream 9357 true Chr06: 30330322-30339678 Phaseolus vulgaris
Phvul.006G209300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 30330322-30335321 Phaseolus vulgaris
Phvul.006G209300 5.0kb downstream 5.0kb downstream 9357 true Chr06: 30335322-30344678 Phaseolus vulgaris
Phvul.006G209300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 30339679-30344678 Phaseolus vulgaris
Phvul.006G209300 10.0kb upstream 10.0kb upstream 14357 true Chr06: 30325322-30339678 Phaseolus vulgaris
Phvul.006G209300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 30325322-30335321 Phaseolus vulgaris
Phvul.006G209300 10.0kb downstream 10.0kb downstream 14357 true Chr06: 30335322-30349678 Phaseolus vulgaris
Phvul.006G209300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 30339679-30349678 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304631 5265 Fabidae View MSA
124067383 5270 Rosid View MSA
123736522 5271 Pentapetalae View MSA
122789844 5272 Eudicot View MSA
122050239 5273 Angiosperm View MSA
121349588 5274 Embryophyte View MSA
123424735 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.1437 0.0 78.2951    
cufflinks 52.119 0.0 139.652 High  
cufflinks 44.1605 0.0 117.028 High  
cufflinks 37.7308 0.0 98.4916 High  
cufflinks 52.6091 0.0 140.451 High High
cufflinks 25.2211 0.0 65.2656   Low
cufflinks 29.026 0.0 75.3085 High  
cufflinks 25.0895 0.0 64.9376   Low
cufflinks 26.47 0.0 68.5113   Low
cufflinks 51.2816 0.0 137.131 High  
cufflinks 58.9174 0.0 159.037 High High

0 Strain