Gene : Phvul.009G099600 P. vulgaris v2.1
Defline:  (1 of 1) K00930 - acetylglutamate kinase (argB) Genomic Order:  1026
Name:  ? Phvul.009G099600 Secondary Identifier:  ? PAC:37151935
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris ARGSYNBSUB-PWY Phaseolus vulgaris pathologic  
Pvulgaris ARGSYN-PWY Phaseolus vulgaris pathologic  
Pvulgaris GLUTORN-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G099600 0.5kb upstream 0.5kb upstream 1541 true Chr09: 15640584-15642124 Phaseolus vulgaris
Phvul.009G099600 0.5kb upstream 0.5kb upstream 500 false Chr09: 15641625-15642124 Phaseolus vulgaris
Phvul.009G099600 0.5kb downstream 0.5kb downstream 1541 true Chr09: 15640084-15641624 Phaseolus vulgaris
Phvul.009G099600 0.5kb downstream 0.5kb downstream 500 false Chr09: 15640084-15640583 Phaseolus vulgaris
Phvul.009G099600 1.0kb upstream 1.0kb upstream 2041 true Chr09: 15640584-15642624 Phaseolus vulgaris
Phvul.009G099600 1.0kb upstream 1.0kb upstream 1000 false Chr09: 15641625-15642624 Phaseolus vulgaris
Phvul.009G099600 1.0kb downstream 1.0kb downstream 2041 true Chr09: 15639584-15641624 Phaseolus vulgaris
Phvul.009G099600 1.0kb downstream 1.0kb downstream 1000 false Chr09: 15639584-15640583 Phaseolus vulgaris
Phvul.009G099600 2.0kb upstream 2.0kb upstream 3041 true Chr09: 15640584-15643624 Phaseolus vulgaris
Phvul.009G099600 2.0kb upstream 2.0kb upstream 2000 false Chr09: 15641625-15643624 Phaseolus vulgaris
Phvul.009G099600 2.0kb downstream 2.0kb downstream 3041 true Chr09: 15638584-15641624 Phaseolus vulgaris
Phvul.009G099600 2.0kb downstream 2.0kb downstream 2000 false Chr09: 15638584-15640583 Phaseolus vulgaris
Phvul.009G099600 5.0kb upstream 5.0kb upstream 6041 true Chr09: 15640584-15646624 Phaseolus vulgaris
Phvul.009G099600 5.0kb upstream 5.0kb upstream 5000 false Chr09: 15641625-15646624 Phaseolus vulgaris
Phvul.009G099600 5.0kb downstream 5.0kb downstream 6041 true Chr09: 15635584-15641624 Phaseolus vulgaris
Phvul.009G099600 5.0kb downstream 5.0kb downstream 5000 false Chr09: 15635584-15640583 Phaseolus vulgaris
Phvul.009G099600 10.0kb upstream 10.0kb upstream 11041 true Chr09: 15640584-15651624 Phaseolus vulgaris
Phvul.009G099600 10.0kb upstream 10.0kb upstream 10000 false Chr09: 15641625-15651624 Phaseolus vulgaris
Phvul.009G099600 10.0kb downstream 10.0kb downstream 11041 true Chr09: 15630584-15641624 Phaseolus vulgaris
Phvul.009G099600 10.0kb downstream 10.0kb downstream 10000 false Chr09: 15630584-15640583 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301730 5265 Fabidae View MSA
124062864 5270 Rosid View MSA
123739875 5271 Pentapetalae View MSA
122792416 5272 Eudicot View MSA
122045485 5273 Angiosperm View MSA
121347525 5274 Embryophyte View MSA
123424020 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.5153 0.0 42.1265    
cufflinks 29.917 0.0 78.0244    
cufflinks 48.0922 0.0 124.311 High High
cufflinks 32.4043 0.0 83.8589    
cufflinks 24.3495 0.0 63.7294    
cufflinks 37.5641 0.0 97.3342 High High
cufflinks 12.4684 0.0 34.2428   Low
cufflinks 16.3456 0.0 44.3495    
cufflinks 14.6688 0.0 39.7637   Low
cufflinks 18.0967 0.0 48.6013    
cufflinks 24.7552 0.0 64.7326    

0 Strain