Gene : Phvul.006G207300 P. vulgaris v2.1
Defline:  (1 of 2) K08917 - light-harvesting complex II chlorophyll a/b binding protein 6 (LHCB6) Genomic Order:  2089
Name:  ? Phvul.006G207300 Secondary Identifier:  ? PAC:37171903
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G207300 0.5kb upstream 0.5kb upstream 2772 true Chr06: 30205595-30208366 Phaseolus vulgaris
Phvul.006G207300 0.5kb upstream 0.5kb upstream 500 false Chr06: 30207867-30208366 Phaseolus vulgaris
Phvul.006G207300 0.5kb downstream 0.5kb downstream 2772 true Chr06: 30205095-30207866 Phaseolus vulgaris
Phvul.006G207300 0.5kb downstream 0.5kb downstream 500 false Chr06: 30205095-30205594 Phaseolus vulgaris
Phvul.006G207300 1.0kb upstream 1.0kb upstream 3272 true Chr06: 30205595-30208866 Phaseolus vulgaris
Phvul.006G207300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 30207867-30208866 Phaseolus vulgaris
Phvul.006G207300 1.0kb downstream 1.0kb downstream 3272 true Chr06: 30204595-30207866 Phaseolus vulgaris
Phvul.006G207300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 30204595-30205594 Phaseolus vulgaris
Phvul.006G207300 2.0kb upstream 2.0kb upstream 4272 true Chr06: 30205595-30209866 Phaseolus vulgaris
Phvul.006G207300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 30207867-30209866 Phaseolus vulgaris
Phvul.006G207300 2.0kb downstream 2.0kb downstream 4272 true Chr06: 30203595-30207866 Phaseolus vulgaris
Phvul.006G207300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 30203595-30205594 Phaseolus vulgaris
Phvul.006G207300 5.0kb upstream 5.0kb upstream 7272 true Chr06: 30205595-30212866 Phaseolus vulgaris
Phvul.006G207300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 30207867-30212866 Phaseolus vulgaris
Phvul.006G207300 5.0kb downstream 5.0kb downstream 7272 true Chr06: 30200595-30207866 Phaseolus vulgaris
Phvul.006G207300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 30200595-30205594 Phaseolus vulgaris
Phvul.006G207300 10.0kb upstream 10.0kb upstream 12272 true Chr06: 30205595-30217866 Phaseolus vulgaris
Phvul.006G207300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 30207867-30217866 Phaseolus vulgaris
Phvul.006G207300 10.0kb downstream 10.0kb downstream 12272 true Chr06: 30195595-30207866 Phaseolus vulgaris
Phvul.006G207300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 30195595-30205594 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311763 5265 Fabidae View MSA
124068665 5270 Rosid View MSA
123745282 5271 Pentapetalae View MSA
122788201 5272 Eudicot View MSA
122042531 5273 Angiosperm View MSA
121350849 5274 Embryophyte View MSA
123381903 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 135.989 0.0 411.057 High  
cufflinks 342.734 0.0 1403.48 High  
cufflinks 2732.25 0.0 16984.4 High High
cufflinks 247.205 0.0 879.388 High  
cufflinks 240.09 0.0 836.214 High  
cufflinks 891.486 0.0 4004.74 High  
cufflinks 3.48124 0.0 13.0472   Low
cufflinks 3.49315 0.0 13.536   Low
cufflinks 5.07689 0.0 17.8797   Low
cufflinks 84.6074 0.0 277.146 High  
cufflinks 185.427 0.0 594.884 High  

0 Strain