Gene : Phvul.009G224800 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31384:SF21 - AUXIN RESPONSE FACTOR 19-RELATED Genomic Order:  2299
Name:  ? Phvul.009G224800 Secondary Identifier:  ? PAC:37149759
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G224800 0.5kb upstream 0.5kb upstream 8735 true Chr09: 33870310-33879044 Phaseolus vulgaris
Phvul.009G224800 0.5kb upstream 0.5kb upstream 500 false Chr09: 33870310-33870809 Phaseolus vulgaris
Phvul.009G224800 0.5kb downstream 0.5kb downstream 8735 true Chr09: 33870810-33879544 Phaseolus vulgaris
Phvul.009G224800 0.5kb downstream 0.5kb downstream 500 false Chr09: 33879045-33879544 Phaseolus vulgaris
Phvul.009G224800 1.0kb upstream 1.0kb upstream 9235 true Chr09: 33869810-33879044 Phaseolus vulgaris
Phvul.009G224800 1.0kb upstream 1.0kb upstream 1000 false Chr09: 33869810-33870809 Phaseolus vulgaris
Phvul.009G224800 1.0kb downstream 1.0kb downstream 9235 true Chr09: 33870810-33880044 Phaseolus vulgaris
Phvul.009G224800 1.0kb downstream 1.0kb downstream 1000 false Chr09: 33879045-33880044 Phaseolus vulgaris
Phvul.009G224800 2.0kb upstream 2.0kb upstream 10235 true Chr09: 33868810-33879044 Phaseolus vulgaris
Phvul.009G224800 2.0kb upstream 2.0kb upstream 2000 false Chr09: 33868810-33870809 Phaseolus vulgaris
Phvul.009G224800 2.0kb downstream 2.0kb downstream 10235 true Chr09: 33870810-33881044 Phaseolus vulgaris
Phvul.009G224800 2.0kb downstream 2.0kb downstream 2000 false Chr09: 33879045-33881044 Phaseolus vulgaris
Phvul.009G224800 5.0kb upstream 5.0kb upstream 13235 true Chr09: 33865810-33879044 Phaseolus vulgaris
Phvul.009G224800 5.0kb upstream 5.0kb upstream 5000 false Chr09: 33865810-33870809 Phaseolus vulgaris
Phvul.009G224800 5.0kb downstream 5.0kb downstream 13235 true Chr09: 33870810-33884044 Phaseolus vulgaris
Phvul.009G224800 5.0kb downstream 5.0kb downstream 5000 false Chr09: 33879045-33884044 Phaseolus vulgaris
Phvul.009G224800 10.0kb upstream 10.0kb upstream 18235 true Chr09: 33860810-33879044 Phaseolus vulgaris
Phvul.009G224800 10.0kb upstream 10.0kb upstream 10000 false Chr09: 33860810-33870809 Phaseolus vulgaris
Phvul.009G224800 10.0kb downstream 10.0kb downstream 18235 true Chr09: 33870810-33889044 Phaseolus vulgaris
Phvul.009G224800 10.0kb downstream 10.0kb downstream 10000 false Chr09: 33879045-33889044 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314345 5265 Fabidae View MSA
124073682 5270 Rosid View MSA
123741284 5271 Pentapetalae View MSA
122791344 5272 Eudicot View MSA
122042731 5273 Angiosperm View MSA
121351367 5274 Embryophyte View MSA
123382140 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.9081 0.0 5.42336   Low
cufflinks 10.3697 0.0 26.8219    
cufflinks 8.97648 0.0 23.2028    
cufflinks 3.19726 0.0 8.70949   Low
cufflinks 29.1571 0.0 79.8791   High
cufflinks 9.01275 0.0 23.2965    
cufflinks 21.155 0.0 56.578    
cufflinks 13.8027 0.0 36.0072    
cufflinks 20.1026 0.0 53.5146    
cufflinks 7.74304 0.0 20.0437    
cufflinks 27.3139 0.0 74.2901   High

0 Strain