Gene : Phvul.009G224900 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10772:SF0 - 20 KDA CHAPERONIN, CHLOROPLASTIC Genomic Order:  2300
Name:  ? Phvul.009G224900 Secondary Identifier:  ? PAC:37149081
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G224900 0.5kb upstream 0.5kb upstream 3485 true Chr09: 33880674-33884158 Phaseolus vulgaris
Phvul.009G224900 0.5kb upstream 0.5kb upstream 500 false Chr09: 33883659-33884158 Phaseolus vulgaris
Phvul.009G224900 0.5kb downstream 0.5kb downstream 3485 true Chr09: 33880174-33883658 Phaseolus vulgaris
Phvul.009G224900 0.5kb downstream 0.5kb downstream 500 false Chr09: 33880174-33880673 Phaseolus vulgaris
Phvul.009G224900 1.0kb upstream 1.0kb upstream 3985 true Chr09: 33880674-33884658 Phaseolus vulgaris
Phvul.009G224900 1.0kb upstream 1.0kb upstream 1000 false Chr09: 33883659-33884658 Phaseolus vulgaris
Phvul.009G224900 1.0kb downstream 1.0kb downstream 3985 true Chr09: 33879674-33883658 Phaseolus vulgaris
Phvul.009G224900 1.0kb downstream 1.0kb downstream 1000 false Chr09: 33879674-33880673 Phaseolus vulgaris
Phvul.009G224900 2.0kb upstream 2.0kb upstream 4985 true Chr09: 33880674-33885658 Phaseolus vulgaris
Phvul.009G224900 2.0kb upstream 2.0kb upstream 2000 false Chr09: 33883659-33885658 Phaseolus vulgaris
Phvul.009G224900 2.0kb downstream 2.0kb downstream 4985 true Chr09: 33878674-33883658 Phaseolus vulgaris
Phvul.009G224900 2.0kb downstream 2.0kb downstream 2000 false Chr09: 33878674-33880673 Phaseolus vulgaris
Phvul.009G224900 5.0kb upstream 5.0kb upstream 7985 true Chr09: 33880674-33888658 Phaseolus vulgaris
Phvul.009G224900 5.0kb upstream 5.0kb upstream 5000 false Chr09: 33883659-33888658 Phaseolus vulgaris
Phvul.009G224900 5.0kb downstream 5.0kb downstream 7985 true Chr09: 33875674-33883658 Phaseolus vulgaris
Phvul.009G224900 5.0kb downstream 5.0kb downstream 5000 false Chr09: 33875674-33880673 Phaseolus vulgaris
Phvul.009G224900 10.0kb upstream 10.0kb upstream 12985 true Chr09: 33880674-33893658 Phaseolus vulgaris
Phvul.009G224900 10.0kb upstream 10.0kb upstream 10000 false Chr09: 33883659-33893658 Phaseolus vulgaris
Phvul.009G224900 10.0kb downstream 10.0kb downstream 12985 true Chr09: 33870674-33883658 Phaseolus vulgaris
Phvul.009G224900 10.0kb downstream 10.0kb downstream 10000 false Chr09: 33870674-33880673 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299713 5265 Fabidae View MSA
124064772 5270 Rosid View MSA
123741725 5271 Pentapetalae View MSA
122790070 5272 Eudicot View MSA
122045141 5273 Angiosperm View MSA
121344791 5274 Embryophyte View MSA
123424643 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 194.005 0.0 564.72 High  
cufflinks 263.475 0.0 798.633 High High
cufflinks 229.672 0.0 682.515 High  
cufflinks 295.659 0.0 905.21 High High
cufflinks 124.256 0.0 341.088 High  
cufflinks 241.063 0.0 721.707 High  
cufflinks 51.7301 0.0 134.452 High Low
cufflinks 87.067 0.0 233.264 High  
cufflinks 67.6941 0.0 177.901 High Low
cufflinks 70.536 0.0 185.411 High  
cufflinks 92.3176 0.0 247.311 High  

0 Strain