Gene : Phvul.009G213300 P. vulgaris v2.1
Defline:  (1 of 5) K17964 - leucine-rich PPR motif-containing protein, mitochondrial (LRPPRC) Genomic Order:  2185
Name:  ? Phvul.009G213300 Secondary Identifier:  ? PAC:37148715
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G213300 0.5kb upstream 0.5kb upstream 4324 true Chr09: 32244254-32248577 Phaseolus vulgaris
Phvul.009G213300 0.5kb upstream 0.5kb upstream 500 false Chr09: 32248078-32248577 Phaseolus vulgaris
Phvul.009G213300 0.5kb downstream 0.5kb downstream 4324 true Chr09: 32243754-32248077 Phaseolus vulgaris
Phvul.009G213300 0.5kb downstream 0.5kb downstream 500 false Chr09: 32243754-32244253 Phaseolus vulgaris
Phvul.009G213300 1.0kb upstream 1.0kb upstream 4824 true Chr09: 32244254-32249077 Phaseolus vulgaris
Phvul.009G213300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 32248078-32249077 Phaseolus vulgaris
Phvul.009G213300 1.0kb downstream 1.0kb downstream 4824 true Chr09: 32243254-32248077 Phaseolus vulgaris
Phvul.009G213300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 32243254-32244253 Phaseolus vulgaris
Phvul.009G213300 2.0kb upstream 2.0kb upstream 5824 true Chr09: 32244254-32250077 Phaseolus vulgaris
Phvul.009G213300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 32248078-32250077 Phaseolus vulgaris
Phvul.009G213300 2.0kb downstream 2.0kb downstream 5824 true Chr09: 32242254-32248077 Phaseolus vulgaris
Phvul.009G213300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 32242254-32244253 Phaseolus vulgaris
Phvul.009G213300 5.0kb upstream 5.0kb upstream 8824 true Chr09: 32244254-32253077 Phaseolus vulgaris
Phvul.009G213300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 32248078-32253077 Phaseolus vulgaris
Phvul.009G213300 5.0kb downstream 5.0kb downstream 8824 true Chr09: 32239254-32248077 Phaseolus vulgaris
Phvul.009G213300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 32239254-32244253 Phaseolus vulgaris
Phvul.009G213300 10.0kb upstream 10.0kb upstream 13824 true Chr09: 32244254-32258077 Phaseolus vulgaris
Phvul.009G213300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 32248078-32258077 Phaseolus vulgaris
Phvul.009G213300 10.0kb downstream 10.0kb downstream 13824 true Chr09: 32234254-32248077 Phaseolus vulgaris
Phvul.009G213300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 32234254-32244253 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300768 5265 Fabidae View MSA
124068595 5270 Rosid View MSA
123745749 5271 Pentapetalae View MSA
122788083 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.528077 0.0 1.76408   Low
cufflinks 1.49413 0.0 4.44484   High
cufflinks 0.999096 0.0 3.11109    
cufflinks 0.693997 0.0 2.27765    
cufflinks 0.905771 0.0 2.8546    
cufflinks 1.07979 0.0 3.33233    
cufflinks 0.754719 0.0 2.41916    
cufflinks 1.12779 0.0 3.45685    
cufflinks 1.26752 0.0 3.85512   High
cufflinks 0.884719 0.0 2.79621    
cufflinks 0.772452 0.0 2.47879    

0 Strain