Gene : Phvul.009G207100 P. vulgaris v2.1
Defline:  (1 of 1) K02684 - DNA primase small subunit (PRI1) Genomic Order:  2122
Name:  ? Phvul.009G207100 Secondary Identifier:  ? PAC:37148836
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G207100 0.5kb upstream 0.5kb upstream 5133 true Chr09: 31403409-31408541 Phaseolus vulgaris
Phvul.009G207100 0.5kb upstream 0.5kb upstream 500 false Chr09: 31408042-31408541 Phaseolus vulgaris
Phvul.009G207100 0.5kb downstream 0.5kb downstream 5133 true Chr09: 31402909-31408041 Phaseolus vulgaris
Phvul.009G207100 0.5kb downstream 0.5kb downstream 500 false Chr09: 31402909-31403408 Phaseolus vulgaris
Phvul.009G207100 1.0kb upstream 1.0kb upstream 5633 true Chr09: 31403409-31409041 Phaseolus vulgaris
Phvul.009G207100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 31408042-31409041 Phaseolus vulgaris
Phvul.009G207100 1.0kb downstream 1.0kb downstream 5633 true Chr09: 31402409-31408041 Phaseolus vulgaris
Phvul.009G207100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 31402409-31403408 Phaseolus vulgaris
Phvul.009G207100 2.0kb upstream 2.0kb upstream 6633 true Chr09: 31403409-31410041 Phaseolus vulgaris
Phvul.009G207100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 31408042-31410041 Phaseolus vulgaris
Phvul.009G207100 2.0kb downstream 2.0kb downstream 6633 true Chr09: 31401409-31408041 Phaseolus vulgaris
Phvul.009G207100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 31401409-31403408 Phaseolus vulgaris
Phvul.009G207100 5.0kb upstream 5.0kb upstream 9633 true Chr09: 31403409-31413041 Phaseolus vulgaris
Phvul.009G207100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 31408042-31413041 Phaseolus vulgaris
Phvul.009G207100 5.0kb downstream 5.0kb downstream 9633 true Chr09: 31398409-31408041 Phaseolus vulgaris
Phvul.009G207100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 31398409-31403408 Phaseolus vulgaris
Phvul.009G207100 10.0kb upstream 10.0kb upstream 14633 true Chr09: 31403409-31418041 Phaseolus vulgaris
Phvul.009G207100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 31408042-31418041 Phaseolus vulgaris
Phvul.009G207100 10.0kb downstream 10.0kb downstream 14633 true Chr09: 31393409-31408041 Phaseolus vulgaris
Phvul.009G207100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 31393409-31403408 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302363 5265 Fabidae View MSA
124063611 5270 Rosid View MSA
123741537 5271 Pentapetalae View MSA
122792233 5272 Eudicot View MSA
122044142 5273 Angiosperm View MSA
121345966 5274 Embryophyte View MSA
123424761 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.9124 0.0 11.6991    
cufflinks 7.66506 0.0 21.4568    
cufflinks 2.53005 0.0 7.96735    
cufflinks 5.89639 0.0 17.0516    
cufflinks 3.34419 0.0 10.3229    
cufflinks 6.47196 0.0 18.392    
cufflinks 5.7754 0.0 16.6636    
cufflinks 7.83615 0.0 21.8293    
cufflinks 5.79266 0.0 16.7443    
cufflinks 0.527612 0.0 1.96405   Low
cufflinks 4.06655 0.0 12.2615    

0 Strain