Gene : Phvul.009G209400 P. vulgaris v2.1
Defline:  (1 of 5) K17964 - leucine-rich PPR motif-containing protein, mitochondrial (LRPPRC) Genomic Order:  2146
Name:  ? Phvul.009G209400 Secondary Identifier:  ? PAC:37151520
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G209400 0.5kb upstream 0.5kb upstream 8790 true Chr09: 31685913-31694702 Phaseolus vulgaris
Phvul.009G209400 0.5kb upstream 0.5kb upstream 500 false Chr09: 31685913-31686412 Phaseolus vulgaris
Phvul.009G209400 0.5kb downstream 0.5kb downstream 8790 true Chr09: 31686413-31695202 Phaseolus vulgaris
Phvul.009G209400 0.5kb downstream 0.5kb downstream 500 false Chr09: 31694703-31695202 Phaseolus vulgaris
Phvul.009G209400 1.0kb upstream 1.0kb upstream 9290 true Chr09: 31685413-31694702 Phaseolus vulgaris
Phvul.009G209400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 31685413-31686412 Phaseolus vulgaris
Phvul.009G209400 1.0kb downstream 1.0kb downstream 9290 true Chr09: 31686413-31695702 Phaseolus vulgaris
Phvul.009G209400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 31694703-31695702 Phaseolus vulgaris
Phvul.009G209400 2.0kb upstream 2.0kb upstream 10290 true Chr09: 31684413-31694702 Phaseolus vulgaris
Phvul.009G209400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 31684413-31686412 Phaseolus vulgaris
Phvul.009G209400 2.0kb downstream 2.0kb downstream 10290 true Chr09: 31686413-31696702 Phaseolus vulgaris
Phvul.009G209400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 31694703-31696702 Phaseolus vulgaris
Phvul.009G209400 5.0kb upstream 5.0kb upstream 13290 true Chr09: 31681413-31694702 Phaseolus vulgaris
Phvul.009G209400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 31681413-31686412 Phaseolus vulgaris
Phvul.009G209400 5.0kb downstream 5.0kb downstream 13290 true Chr09: 31686413-31699702 Phaseolus vulgaris
Phvul.009G209400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 31694703-31699702 Phaseolus vulgaris
Phvul.009G209400 10.0kb upstream 10.0kb upstream 18290 true Chr09: 31676413-31694702 Phaseolus vulgaris
Phvul.009G209400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 31676413-31686412 Phaseolus vulgaris
Phvul.009G209400 10.0kb downstream 10.0kb downstream 18290 true Chr09: 31686413-31704702 Phaseolus vulgaris
Phvul.009G209400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 31694703-31704702 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302229 5265 Fabidae View MSA
124066069 5270 Rosid View MSA
123753756 5271 Pentapetalae View MSA
122797794 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.629819 0.0 2.06558   Low
cufflinks 1.03392 0.0 3.21497    
cufflinks 2.67279 0.0 7.45714    
cufflinks 0.639331 0.0 2.12728   Low
cufflinks 2.01347 0.0 5.85012    
cufflinks 2.59203 0.0 7.27933    
cufflinks 2.58329 0.0 7.28329    
cufflinks 2.57216 0.0 7.19964    
cufflinks 1.84707 0.0 5.41579    
cufflinks 3.03222 0.0 8.40528   High
cufflinks 1.17165 0.0 3.61877    

0 Strain