Gene : Phvul.009G186300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10438:SF263 - THIOREDOXIN-LIKE 1-2, CHLOROPLASTIC Genomic Order:  1904
Name:  ? Phvul.009G186300 Secondary Identifier:  ? PAC:37151597
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G186300 0.5kb upstream 0.5kb upstream 2056 true Chr09: 28186811-28188866 Phaseolus vulgaris
Phvul.009G186300 0.5kb upstream 0.5kb upstream 500 false Chr09: 28186811-28187310 Phaseolus vulgaris
Phvul.009G186300 0.5kb downstream 0.5kb downstream 2056 true Chr09: 28187311-28189366 Phaseolus vulgaris
Phvul.009G186300 0.5kb downstream 0.5kb downstream 500 false Chr09: 28188867-28189366 Phaseolus vulgaris
Phvul.009G186300 1.0kb upstream 1.0kb upstream 2556 true Chr09: 28186311-28188866 Phaseolus vulgaris
Phvul.009G186300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 28186311-28187310 Phaseolus vulgaris
Phvul.009G186300 1.0kb downstream 1.0kb downstream 2556 true Chr09: 28187311-28189866 Phaseolus vulgaris
Phvul.009G186300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 28188867-28189866 Phaseolus vulgaris
Phvul.009G186300 2.0kb upstream 2.0kb upstream 3556 true Chr09: 28185311-28188866 Phaseolus vulgaris
Phvul.009G186300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 28185311-28187310 Phaseolus vulgaris
Phvul.009G186300 2.0kb downstream 2.0kb downstream 3556 true Chr09: 28187311-28190866 Phaseolus vulgaris
Phvul.009G186300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 28188867-28190866 Phaseolus vulgaris
Phvul.009G186300 5.0kb upstream 5.0kb upstream 6556 true Chr09: 28182311-28188866 Phaseolus vulgaris
Phvul.009G186300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 28182311-28187310 Phaseolus vulgaris
Phvul.009G186300 5.0kb downstream 5.0kb downstream 6556 true Chr09: 28187311-28193866 Phaseolus vulgaris
Phvul.009G186300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 28188867-28193866 Phaseolus vulgaris
Phvul.009G186300 10.0kb upstream 10.0kb upstream 11556 true Chr09: 28177311-28188866 Phaseolus vulgaris
Phvul.009G186300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 28177311-28187310 Phaseolus vulgaris
Phvul.009G186300 10.0kb downstream 10.0kb downstream 11556 true Chr09: 28187311-28198866 Phaseolus vulgaris
Phvul.009G186300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 28188867-28198866 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305608 5265 Fabidae View MSA
124069337 5270 Rosid View MSA
123745414 5271 Pentapetalae View MSA
122792337 5272 Eudicot View MSA
122048222 5273 Angiosperm View MSA
121347781 5274 Embryophyte View MSA
123427936 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.90591 0.0 12.2452    
cufflinks 10.0368 0.0 28.4129   High
cufflinks 0.510092 0.0 1.96161 Low Low
cufflinks 10.2947 0.0 29.3633   High
cufflinks 4.38446 0.0 13.7112    
cufflinks 0.38206 0.0 1.50402 Low Low
cufflinks 0.959203 0.0 3.50488    
cufflinks 1.73425 0.0 5.92945    
cufflinks 4.01189 0.0 12.6312    
cufflinks 3.90504 0.0 12.2927    
cufflinks 0.592515 0.0 2.265   Low

0 Strain