Gene : Phvul.009G186500 P. vulgaris v2.1
Defline:  (1 of 1) K08910 - light-harvesting complex I chlorophyll a/b binding protein 4 (LHCA4) Genomic Order:  1906
Name:  ? Phvul.009G186500 Secondary Identifier:  ? PAC:37149008
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G186500 0.5kb upstream 0.5kb upstream 2115 true Chr09: 28223778-28225892 Phaseolus vulgaris
Phvul.009G186500 0.5kb upstream 0.5kb upstream 500 false Chr09: 28223778-28224277 Phaseolus vulgaris
Phvul.009G186500 0.5kb downstream 0.5kb downstream 2115 true Chr09: 28224278-28226392 Phaseolus vulgaris
Phvul.009G186500 0.5kb downstream 0.5kb downstream 500 false Chr09: 28225893-28226392 Phaseolus vulgaris
Phvul.009G186500 1.0kb upstream 1.0kb upstream 2615 true Chr09: 28223278-28225892 Phaseolus vulgaris
Phvul.009G186500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 28223278-28224277 Phaseolus vulgaris
Phvul.009G186500 1.0kb downstream 1.0kb downstream 2615 true Chr09: 28224278-28226892 Phaseolus vulgaris
Phvul.009G186500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 28225893-28226892 Phaseolus vulgaris
Phvul.009G186500 2.0kb upstream 2.0kb upstream 3615 true Chr09: 28222278-28225892 Phaseolus vulgaris
Phvul.009G186500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 28222278-28224277 Phaseolus vulgaris
Phvul.009G186500 2.0kb downstream 2.0kb downstream 3615 true Chr09: 28224278-28227892 Phaseolus vulgaris
Phvul.009G186500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 28225893-28227892 Phaseolus vulgaris
Phvul.009G186500 5.0kb upstream 5.0kb upstream 6615 true Chr09: 28219278-28225892 Phaseolus vulgaris
Phvul.009G186500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 28219278-28224277 Phaseolus vulgaris
Phvul.009G186500 5.0kb downstream 5.0kb downstream 6615 true Chr09: 28224278-28230892 Phaseolus vulgaris
Phvul.009G186500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 28225893-28230892 Phaseolus vulgaris
Phvul.009G186500 10.0kb upstream 10.0kb upstream 11615 true Chr09: 28214278-28225892 Phaseolus vulgaris
Phvul.009G186500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 28214278-28224277 Phaseolus vulgaris
Phvul.009G186500 10.0kb downstream 10.0kb downstream 11615 true Chr09: 28224278-28235892 Phaseolus vulgaris
Phvul.009G186500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 28225893-28235892 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313401 5265 Fabidae View MSA
124068607 5270 Rosid View MSA
123738583 5271 Pentapetalae View MSA
122789063 5272 Eudicot View MSA
122041547 5273 Angiosperm View MSA
121346524 5274 Embryophyte View MSA
123425939 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 217.452 0.0 640.854 High  
cufflinks 518.416 0.0 1794.58 High  
cufflinks 4112.17 0.0 25182.9 High High
cufflinks 212.962 0.0 628.302 High  
cufflinks 592.773 0.0 2113.92 High  
cufflinks 1399.47 0.0 6302.0 High  
cufflinks 0.67785 0.0 2.49428   Low
cufflinks 0.217647 0.0 0.879563 Low Low
cufflinks 1.73518 0.0 5.8018   Low
cufflinks 212.84 0.0 625.718 High  
cufflinks 358.494 0.0 1151.01 High  

0 Strain