Gene : Phvul.009G188900 P. vulgaris v2.1
Defline:  (1 of 1) K17428 - large subunit ribosomal protein L47 (MRPL47, NCM1) Genomic Order:  1934
Name:  ? Phvul.009G188900 Secondary Identifier:  ? PAC:37148990
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G188900 0.5kb upstream 0.5kb upstream 2825 true Chr09: 28629632-28632456 Phaseolus vulgaris
Phvul.009G188900 0.5kb upstream 0.5kb upstream 500 false Chr09: 28631957-28632456 Phaseolus vulgaris
Phvul.009G188900 0.5kb downstream 0.5kb downstream 2825 true Chr09: 28629132-28631956 Phaseolus vulgaris
Phvul.009G188900 0.5kb downstream 0.5kb downstream 500 false Chr09: 28629132-28629631 Phaseolus vulgaris
Phvul.009G188900 1.0kb upstream 1.0kb upstream 3325 true Chr09: 28629632-28632956 Phaseolus vulgaris
Phvul.009G188900 1.0kb upstream 1.0kb upstream 1000 false Chr09: 28631957-28632956 Phaseolus vulgaris
Phvul.009G188900 1.0kb downstream 1.0kb downstream 3325 true Chr09: 28628632-28631956 Phaseolus vulgaris
Phvul.009G188900 1.0kb downstream 1.0kb downstream 1000 false Chr09: 28628632-28629631 Phaseolus vulgaris
Phvul.009G188900 2.0kb upstream 2.0kb upstream 4325 true Chr09: 28629632-28633956 Phaseolus vulgaris
Phvul.009G188900 2.0kb upstream 2.0kb upstream 2000 false Chr09: 28631957-28633956 Phaseolus vulgaris
Phvul.009G188900 2.0kb downstream 2.0kb downstream 4325 true Chr09: 28627632-28631956 Phaseolus vulgaris
Phvul.009G188900 2.0kb downstream 2.0kb downstream 2000 false Chr09: 28627632-28629631 Phaseolus vulgaris
Phvul.009G188900 5.0kb upstream 5.0kb upstream 7325 true Chr09: 28629632-28636956 Phaseolus vulgaris
Phvul.009G188900 5.0kb upstream 5.0kb upstream 5000 false Chr09: 28631957-28636956 Phaseolus vulgaris
Phvul.009G188900 5.0kb downstream 5.0kb downstream 7325 true Chr09: 28624632-28631956 Phaseolus vulgaris
Phvul.009G188900 5.0kb downstream 5.0kb downstream 5000 false Chr09: 28624632-28629631 Phaseolus vulgaris
Phvul.009G188900 10.0kb upstream 10.0kb upstream 12325 true Chr09: 28629632-28641956 Phaseolus vulgaris
Phvul.009G188900 10.0kb upstream 10.0kb upstream 10000 false Chr09: 28631957-28641956 Phaseolus vulgaris
Phvul.009G188900 10.0kb downstream 10.0kb downstream 12325 true Chr09: 28619632-28631956 Phaseolus vulgaris
Phvul.009G188900 10.0kb downstream 10.0kb downstream 10000 false Chr09: 28619632-28629631 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312546 5265 Fabidae View MSA
124065847 5270 Rosid View MSA
123748734 5271 Pentapetalae View MSA
122797701 5272 Eudicot View MSA
122044209 5273 Angiosperm View MSA
121343803 5274 Embryophyte View MSA
123425806 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.1566 0.0 39.8727    
cufflinks 20.1852 0.0 55.1025   High
cufflinks 9.06897 0.0 26.703   Low
cufflinks 15.8797 0.0 44.3391    
cufflinks 12.4453 0.0 35.644    
cufflinks 9.61446 0.0 28.1565   Low
cufflinks 10.3622 0.0 30.0897    
cufflinks 14.878 0.0 41.6023    
cufflinks 12.7879 0.0 36.4142    
cufflinks 10.7975 0.0 31.318    
cufflinks 15.6072 0.0 43.7414    

0 Strain