Gene : Phvul.009G178800 P. vulgaris v2.1

Defline:  (1 of 2) K13343 - peroxin-14 (PEX14) Genomic Order:  1827
Name:  ? Phvul.009G178800 Secondary Identifier:  ? PAC:37151992

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G178800 0.5kb upstream 0.5kb upstream 16705 true Chr09: 26776773-26793477 Phaseolus vulgaris
Phvul.009G178800 0.5kb upstream 0.5kb upstream 500 false Chr09: 26792978-26793477 Phaseolus vulgaris
Phvul.009G178800 0.5kb downstream 0.5kb downstream 16705 true Chr09: 26776273-26792977 Phaseolus vulgaris
Phvul.009G178800 0.5kb downstream 0.5kb downstream 500 false Chr09: 26776273-26776772 Phaseolus vulgaris
Phvul.009G178800 1.0kb upstream 1.0kb upstream 17205 true Chr09: 26776773-26793977 Phaseolus vulgaris
Phvul.009G178800 1.0kb upstream 1.0kb upstream 1000 false Chr09: 26792978-26793977 Phaseolus vulgaris
Phvul.009G178800 1.0kb downstream 1.0kb downstream 17205 true Chr09: 26775773-26792977 Phaseolus vulgaris
Phvul.009G178800 1.0kb downstream 1.0kb downstream 1000 false Chr09: 26775773-26776772 Phaseolus vulgaris
Phvul.009G178800 2.0kb upstream 2.0kb upstream 18205 true Chr09: 26776773-26794977 Phaseolus vulgaris
Phvul.009G178800 2.0kb upstream 2.0kb upstream 2000 false Chr09: 26792978-26794977 Phaseolus vulgaris
Phvul.009G178800 2.0kb downstream 2.0kb downstream 18205 true Chr09: 26774773-26792977 Phaseolus vulgaris
Phvul.009G178800 2.0kb downstream 2.0kb downstream 2000 false Chr09: 26774773-26776772 Phaseolus vulgaris
Phvul.009G178800 5.0kb upstream 5.0kb upstream 21205 true Chr09: 26776773-26797977 Phaseolus vulgaris
Phvul.009G178800 5.0kb upstream 5.0kb upstream 5000 false Chr09: 26792978-26797977 Phaseolus vulgaris
Phvul.009G178800 5.0kb downstream 5.0kb downstream 21205 true Chr09: 26771773-26792977 Phaseolus vulgaris
Phvul.009G178800 5.0kb downstream 5.0kb downstream 5000 false Chr09: 26771773-26776772 Phaseolus vulgaris
Phvul.009G178800 10.0kb upstream 10.0kb upstream 26205 true Chr09: 26776773-26802977 Phaseolus vulgaris
Phvul.009G178800 10.0kb upstream 10.0kb upstream 10000 false Chr09: 26792978-26802977 Phaseolus vulgaris
Phvul.009G178800 10.0kb downstream 10.0kb downstream 26205 true Chr09: 26766773-26792977 Phaseolus vulgaris
Phvul.009G178800 10.0kb downstream 10.0kb downstream 10000 false Chr09: 26766773-26776772 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313331 5265 Fabidae View MSA
124067508 5270 Rosid View MSA
123738266 5271 Pentapetalae View MSA
122791777 5272 Eudicot View MSA
122043192 5273 Angiosperm View MSA
121349384 5274 Embryophyte View MSA
123424124 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.8092 0.0 81.2499    
cufflinks 23.0674 0.0 78.7822    
cufflinks 22.7901 0.0 77.8576    
cufflinks 17.3579 0.0 60.6301   Low
cufflinks 23.4596 0.0 80.0849    
cufflinks 18.9438 0.0 65.2585   Low
cufflinks 24.7474 0.0 84.4993    
cufflinks 34.976 0.0 122.057 High High
cufflinks 25.4959 0.0 87.1512    
cufflinks 32.8895 0.0 112.815   High
cufflinks 23.179 0.0 79.0796    

0 Strain