Gene : Phvul.009G179700 P. vulgaris v2.1
Defline:  (1 of 3) PTHR14155//PTHR14155:SF103 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Genomic Order:  1836
Name:  ? Phvul.009G179700 Secondary Identifier:  ? PAC:37151348
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G179700 0.5kb upstream 0.5kb upstream 1441 true Chr09: 26968062-26969502 Phaseolus vulgaris
Phvul.009G179700 0.5kb upstream 0.5kb upstream 500 false Chr09: 26968062-26968561 Phaseolus vulgaris
Phvul.009G179700 0.5kb downstream 0.5kb downstream 1441 true Chr09: 26968562-26970002 Phaseolus vulgaris
Phvul.009G179700 0.5kb downstream 0.5kb downstream 500 false Chr09: 26969503-26970002 Phaseolus vulgaris
Phvul.009G179700 1.0kb upstream 1.0kb upstream 1941 true Chr09: 26967562-26969502 Phaseolus vulgaris
Phvul.009G179700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 26967562-26968561 Phaseolus vulgaris
Phvul.009G179700 1.0kb downstream 1.0kb downstream 1941 true Chr09: 26968562-26970502 Phaseolus vulgaris
Phvul.009G179700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 26969503-26970502 Phaseolus vulgaris
Phvul.009G179700 2.0kb upstream 2.0kb upstream 2941 true Chr09: 26966562-26969502 Phaseolus vulgaris
Phvul.009G179700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 26966562-26968561 Phaseolus vulgaris
Phvul.009G179700 2.0kb downstream 2.0kb downstream 2941 true Chr09: 26968562-26971502 Phaseolus vulgaris
Phvul.009G179700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 26969503-26971502 Phaseolus vulgaris
Phvul.009G179700 5.0kb upstream 5.0kb upstream 5941 true Chr09: 26963562-26969502 Phaseolus vulgaris
Phvul.009G179700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 26963562-26968561 Phaseolus vulgaris
Phvul.009G179700 5.0kb downstream 5.0kb downstream 5941 true Chr09: 26968562-26974502 Phaseolus vulgaris
Phvul.009G179700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 26969503-26974502 Phaseolus vulgaris
Phvul.009G179700 10.0kb upstream 10.0kb upstream 10941 true Chr09: 26958562-26969502 Phaseolus vulgaris
Phvul.009G179700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 26958562-26968561 Phaseolus vulgaris
Phvul.009G179700 10.0kb downstream 10.0kb downstream 10941 true Chr09: 26968562-26979502 Phaseolus vulgaris
Phvul.009G179700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 26969503-26979502 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310591 5265 Fabidae View MSA
124074887 5270 Rosid View MSA
123753111 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.166 0.0 16.418    
cufflinks 4.03402 0.0 13.2271    
cufflinks 6.65094 0.0 20.6161    
cufflinks 0.970847 0.0 3.68682    
cufflinks 5.86182 0.0 18.5942    
cufflinks 1.26861 0.0 4.68368    
cufflinks 0.20838 0.0 0.887165 Low Low
cufflinks 0.154622 0.0 0.677042 Low Low
cufflinks 1.08758 0.0 4.05613    
cufflinks 5.39687 0.0 17.2018    
cufflinks 3.18604 0.0 10.7656    

0 Strain