Gene : Phvul.009G182000 P. vulgaris v2.1
Defline:  (1 of 1) KOG0265//KOG0279//KOG0315//KOG0645 - U5 snRNP-specific protein-like factor and related proteins // G protein beta subunit-like protein // G-protein beta subunit-like protein (contains WD40 repeats) // WD40 repeat protein Genomic Order:  1859
Name:  ? Phvul.009G182000 Secondary Identifier:  ? PAC:37151931
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G182000 0.5kb upstream 0.5kb upstream 2357 true Chr09: 27388348-27390704 Phaseolus vulgaris
Phvul.009G182000 0.5kb upstream 0.5kb upstream 500 false Chr09: 27390205-27390704 Phaseolus vulgaris
Phvul.009G182000 0.5kb downstream 0.5kb downstream 2357 true Chr09: 27387848-27390204 Phaseolus vulgaris
Phvul.009G182000 0.5kb downstream 0.5kb downstream 500 false Chr09: 27387848-27388347 Phaseolus vulgaris
Phvul.009G182000 1.0kb upstream 1.0kb upstream 2857 true Chr09: 27388348-27391204 Phaseolus vulgaris
Phvul.009G182000 1.0kb upstream 1.0kb upstream 1000 false Chr09: 27390205-27391204 Phaseolus vulgaris
Phvul.009G182000 1.0kb downstream 1.0kb downstream 2857 true Chr09: 27387348-27390204 Phaseolus vulgaris
Phvul.009G182000 1.0kb downstream 1.0kb downstream 1000 false Chr09: 27387348-27388347 Phaseolus vulgaris
Phvul.009G182000 2.0kb upstream 2.0kb upstream 3857 true Chr09: 27388348-27392204 Phaseolus vulgaris
Phvul.009G182000 2.0kb upstream 2.0kb upstream 2000 false Chr09: 27390205-27392204 Phaseolus vulgaris
Phvul.009G182000 2.0kb downstream 2.0kb downstream 3857 true Chr09: 27386348-27390204 Phaseolus vulgaris
Phvul.009G182000 2.0kb downstream 2.0kb downstream 2000 false Chr09: 27386348-27388347 Phaseolus vulgaris
Phvul.009G182000 5.0kb upstream 5.0kb upstream 6857 true Chr09: 27388348-27395204 Phaseolus vulgaris
Phvul.009G182000 5.0kb upstream 5.0kb upstream 5000 false Chr09: 27390205-27395204 Phaseolus vulgaris
Phvul.009G182000 5.0kb downstream 5.0kb downstream 6857 true Chr09: 27383348-27390204 Phaseolus vulgaris
Phvul.009G182000 5.0kb downstream 5.0kb downstream 5000 false Chr09: 27383348-27388347 Phaseolus vulgaris
Phvul.009G182000 10.0kb upstream 10.0kb upstream 11857 true Chr09: 27388348-27400204 Phaseolus vulgaris
Phvul.009G182000 10.0kb upstream 10.0kb upstream 10000 false Chr09: 27390205-27400204 Phaseolus vulgaris
Phvul.009G182000 10.0kb downstream 10.0kb downstream 11857 true Chr09: 27378348-27390204 Phaseolus vulgaris
Phvul.009G182000 10.0kb downstream 10.0kb downstream 10000 false Chr09: 27378348-27388347 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310465 5265 Fabidae View MSA
124069746 5270 Rosid View MSA
123745612 5271 Pentapetalae View MSA
122796889 5272 Eudicot View MSA
122049013 5273 Angiosperm View MSA
121349705 5274 Embryophyte View MSA
123428719 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.34793 0.0 4.52583    
cufflinks 2.57988 0.0 8.0446    
cufflinks 1.25972 0.0 4.28384    
cufflinks 1.32312 0.0 4.42962    
cufflinks 2.24277 0.0 7.13847    
cufflinks 0.207583 0.0 0.82468 Low Low
cufflinks 1.78649 0.0 5.74102    
cufflinks 1.00482 0.0 3.47697    
cufflinks 1.73936 0.0 5.60265    
cufflinks 13.7127 0.0 36.3795   High
cufflinks 6.32521 0.0 17.846   High

0 Strain