Gene : Phvul.009G174400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10774//PTHR10774:SF94 - EXTENDED SYNAPTOTAGMIN-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1784
Name:  ? Phvul.009G174400 Secondary Identifier:  ? PAC:37151904
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G174400 0.5kb upstream 0.5kb upstream 4925 true Chr09: 25825171-25830095 Phaseolus vulgaris
Phvul.009G174400 0.5kb upstream 0.5kb upstream 500 false Chr09: 25829596-25830095 Phaseolus vulgaris
Phvul.009G174400 0.5kb downstream 0.5kb downstream 4925 true Chr09: 25824671-25829595 Phaseolus vulgaris
Phvul.009G174400 0.5kb downstream 0.5kb downstream 500 false Chr09: 25824671-25825170 Phaseolus vulgaris
Phvul.009G174400 1.0kb upstream 1.0kb upstream 5425 true Chr09: 25825171-25830595 Phaseolus vulgaris
Phvul.009G174400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 25829596-25830595 Phaseolus vulgaris
Phvul.009G174400 1.0kb downstream 1.0kb downstream 5425 true Chr09: 25824171-25829595 Phaseolus vulgaris
Phvul.009G174400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 25824171-25825170 Phaseolus vulgaris
Phvul.009G174400 2.0kb upstream 2.0kb upstream 6425 true Chr09: 25825171-25831595 Phaseolus vulgaris
Phvul.009G174400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 25829596-25831595 Phaseolus vulgaris
Phvul.009G174400 2.0kb downstream 2.0kb downstream 6425 true Chr09: 25823171-25829595 Phaseolus vulgaris
Phvul.009G174400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 25823171-25825170 Phaseolus vulgaris
Phvul.009G174400 5.0kb upstream 5.0kb upstream 9425 true Chr09: 25825171-25834595 Phaseolus vulgaris
Phvul.009G174400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 25829596-25834595 Phaseolus vulgaris
Phvul.009G174400 5.0kb downstream 5.0kb downstream 9425 true Chr09: 25820171-25829595 Phaseolus vulgaris
Phvul.009G174400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 25820171-25825170 Phaseolus vulgaris
Phvul.009G174400 10.0kb upstream 10.0kb upstream 14425 true Chr09: 25825171-25839595 Phaseolus vulgaris
Phvul.009G174400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 25829596-25839595 Phaseolus vulgaris
Phvul.009G174400 10.0kb downstream 10.0kb downstream 14425 true Chr09: 25815171-25829595 Phaseolus vulgaris
Phvul.009G174400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 25815171-25825170 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300361 5265 Fabidae View MSA
124064213 5270 Rosid View MSA
123738641 5271 Pentapetalae View MSA
122790739 5272 Eudicot View MSA
122048530 5273 Angiosperm View MSA
121350183 5274 Embryophyte View MSA
123381609 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.41868 0.0 1.81466    
cufflinks 4.05102 0.0 14.8582   High
cufflinks 0.208051 0.0 0.974645 Low  
cufflinks 0.492615 0.0 2.08435 Low  
cufflinks 0.087703 0.0 0.355751 Low Low
cufflinks 0.286698 0.0 1.26073 Low  
cufflinks 0.709444 0.0 3.52565    
cufflinks 7.21451 0.0 23.742   High
cufflinks 0.106905 0.0 0.423258 Low Low
cufflinks 1.68053 0.0 7.69009    
cufflinks 0.184416 0.0 0.853135 Low  

0 Strain