Gene : Phvul.009G174700 P. vulgaris v2.1
Defline:  (1 of 3) K02900 - large subunit ribosomal protein L27Ae (RP-L27Ae, RPL27A) Genomic Order:  1787
Name:  ? Phvul.009G174700 Secondary Identifier:  ? PAC:37150004
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G174700 0.5kb upstream 0.5kb upstream 1584 true Chr09: 25862054-25863637 Phaseolus vulgaris
Phvul.009G174700 0.5kb upstream 0.5kb upstream 500 false Chr09: 25862054-25862553 Phaseolus vulgaris
Phvul.009G174700 0.5kb downstream 0.5kb downstream 1584 true Chr09: 25862554-25864137 Phaseolus vulgaris
Phvul.009G174700 0.5kb downstream 0.5kb downstream 500 false Chr09: 25863638-25864137 Phaseolus vulgaris
Phvul.009G174700 1.0kb upstream 1.0kb upstream 2084 true Chr09: 25861554-25863637 Phaseolus vulgaris
Phvul.009G174700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 25861554-25862553 Phaseolus vulgaris
Phvul.009G174700 1.0kb downstream 1.0kb downstream 2084 true Chr09: 25862554-25864637 Phaseolus vulgaris
Phvul.009G174700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 25863638-25864637 Phaseolus vulgaris
Phvul.009G174700 2.0kb upstream 2.0kb upstream 3084 true Chr09: 25860554-25863637 Phaseolus vulgaris
Phvul.009G174700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 25860554-25862553 Phaseolus vulgaris
Phvul.009G174700 2.0kb downstream 2.0kb downstream 3084 true Chr09: 25862554-25865637 Phaseolus vulgaris
Phvul.009G174700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 25863638-25865637 Phaseolus vulgaris
Phvul.009G174700 5.0kb upstream 5.0kb upstream 6084 true Chr09: 25857554-25863637 Phaseolus vulgaris
Phvul.009G174700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 25857554-25862553 Phaseolus vulgaris
Phvul.009G174700 5.0kb downstream 5.0kb downstream 6084 true Chr09: 25862554-25868637 Phaseolus vulgaris
Phvul.009G174700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 25863638-25868637 Phaseolus vulgaris
Phvul.009G174700 10.0kb upstream 10.0kb upstream 11084 true Chr09: 25852554-25863637 Phaseolus vulgaris
Phvul.009G174700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 25852554-25862553 Phaseolus vulgaris
Phvul.009G174700 10.0kb downstream 10.0kb downstream 11084 true Chr09: 25862554-25873637 Phaseolus vulgaris
Phvul.009G174700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 25863638-25873637 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313836 5265 Fabidae View MSA
124061356 5270 Rosid View MSA
123746209 5271 Pentapetalae View MSA
122794134 5272 Eudicot View MSA
122049114 5273 Angiosperm View MSA
121346652 5274 Embryophyte View MSA
123426087 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 68.9961 0.0 180.381 High  
cufflinks 116.287 0.0 315.517 High High
cufflinks 37.7509 0.0 97.6476   Low
cufflinks 107.175 0.0 289.255 High  
cufflinks 111.797 0.0 302.285 High High
cufflinks 45.8151 0.0 118.467 High Low
cufflinks 56.17 0.0 146.163 High  
cufflinks 54.0117 0.0 140.253 High  
cufflinks 103.433 0.0 279.282 High  
cufflinks 46.3678 0.0 119.915 High Low
cufflinks 92.5516 0.0 247.076 High  

0 Strain