Gene : Phvul.009G162100 P. vulgaris v2.1
Defline:  (1 of 3) K03696 - ATP-dependent Clp protease ATP-binding subunit ClpC (clpC) Genomic Order:  1662
Name:  ? Phvul.009G162100 Secondary Identifier:  ? PAC:37148562
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G162100 0.5kb upstream 0.5kb upstream 8278 true Chr09: 24074222-24082499 Phaseolus vulgaris
Phvul.009G162100 0.5kb upstream 0.5kb upstream 500 false Chr09: 24074222-24074721 Phaseolus vulgaris
Phvul.009G162100 0.5kb downstream 0.5kb downstream 8278 true Chr09: 24074722-24082999 Phaseolus vulgaris
Phvul.009G162100 0.5kb downstream 0.5kb downstream 500 false Chr09: 24082500-24082999 Phaseolus vulgaris
Phvul.009G162100 1.0kb upstream 1.0kb upstream 8778 true Chr09: 24073722-24082499 Phaseolus vulgaris
Phvul.009G162100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 24073722-24074721 Phaseolus vulgaris
Phvul.009G162100 1.0kb downstream 1.0kb downstream 8778 true Chr09: 24074722-24083499 Phaseolus vulgaris
Phvul.009G162100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 24082500-24083499 Phaseolus vulgaris
Phvul.009G162100 2.0kb upstream 2.0kb upstream 9778 true Chr09: 24072722-24082499 Phaseolus vulgaris
Phvul.009G162100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 24072722-24074721 Phaseolus vulgaris
Phvul.009G162100 2.0kb downstream 2.0kb downstream 9778 true Chr09: 24074722-24084499 Phaseolus vulgaris
Phvul.009G162100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 24082500-24084499 Phaseolus vulgaris
Phvul.009G162100 5.0kb upstream 5.0kb upstream 12778 true Chr09: 24069722-24082499 Phaseolus vulgaris
Phvul.009G162100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 24069722-24074721 Phaseolus vulgaris
Phvul.009G162100 5.0kb downstream 5.0kb downstream 12778 true Chr09: 24074722-24087499 Phaseolus vulgaris
Phvul.009G162100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 24082500-24087499 Phaseolus vulgaris
Phvul.009G162100 10.0kb upstream 10.0kb upstream 17778 true Chr09: 24064722-24082499 Phaseolus vulgaris
Phvul.009G162100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 24064722-24074721 Phaseolus vulgaris
Phvul.009G162100 10.0kb downstream 10.0kb downstream 17778 true Chr09: 24074722-24092499 Phaseolus vulgaris
Phvul.009G162100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 24082500-24092499 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307634 5265 Fabidae View MSA
124063020 5270 Rosid View MSA
123738110 5271 Pentapetalae View MSA
122796801 5272 Eudicot View MSA
122047694 5273 Angiosperm View MSA
121345923 5274 Embryophyte View MSA
123426532 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 356.025 0.0 1581.51 High High
cufflinks 122.824 0.0 415.406 High  
cufflinks 516.214 0.0 2548.7 High High
cufflinks 70.083 0.0 210.127 High  
cufflinks 84.5003 0.0 262.304 High  
cufflinks 318.418 0.0 1377.7 High High
cufflinks 48.9997 0.0 141.989 High Low
cufflinks 45.8974 0.0 132.566 High Low
cufflinks 56.269 0.0 165.729 High  
cufflinks 213.057 0.0 820.471 High  
cufflinks 82.7327 0.0 257.195 High  

0 Strain