Gene : Phvul.009G165300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR13780:SF45 - CBS DOMAIN-CONTAINING PROTEIN CBSCBSPB4-RELATED Genomic Order:  1694
Name:  ? Phvul.009G165300 Secondary Identifier:  ? PAC:37151476
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G165300 0.5kb upstream 0.5kb upstream 6017 true Chr09: 24644104-24650120 Phaseolus vulgaris
Phvul.009G165300 0.5kb upstream 0.5kb upstream 500 false Chr09: 24644104-24644603 Phaseolus vulgaris
Phvul.009G165300 0.5kb downstream 0.5kb downstream 6017 true Chr09: 24644604-24650620 Phaseolus vulgaris
Phvul.009G165300 0.5kb downstream 0.5kb downstream 500 false Chr09: 24650121-24650620 Phaseolus vulgaris
Phvul.009G165300 1.0kb upstream 1.0kb upstream 6517 true Chr09: 24643604-24650120 Phaseolus vulgaris
Phvul.009G165300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 24643604-24644603 Phaseolus vulgaris
Phvul.009G165300 1.0kb downstream 1.0kb downstream 6517 true Chr09: 24644604-24651120 Phaseolus vulgaris
Phvul.009G165300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 24650121-24651120 Phaseolus vulgaris
Phvul.009G165300 2.0kb upstream 2.0kb upstream 7517 true Chr09: 24642604-24650120 Phaseolus vulgaris
Phvul.009G165300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 24642604-24644603 Phaseolus vulgaris
Phvul.009G165300 2.0kb downstream 2.0kb downstream 7517 true Chr09: 24644604-24652120 Phaseolus vulgaris
Phvul.009G165300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 24650121-24652120 Phaseolus vulgaris
Phvul.009G165300 5.0kb upstream 5.0kb upstream 10517 true Chr09: 24639604-24650120 Phaseolus vulgaris
Phvul.009G165300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 24639604-24644603 Phaseolus vulgaris
Phvul.009G165300 5.0kb downstream 5.0kb downstream 10517 true Chr09: 24644604-24655120 Phaseolus vulgaris
Phvul.009G165300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 24650121-24655120 Phaseolus vulgaris
Phvul.009G165300 10.0kb upstream 10.0kb upstream 15517 true Chr09: 24634604-24650120 Phaseolus vulgaris
Phvul.009G165300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 24634604-24644603 Phaseolus vulgaris
Phvul.009G165300 10.0kb downstream 10.0kb downstream 15517 true Chr09: 24644604-24660120 Phaseolus vulgaris
Phvul.009G165300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 24650121-24660120 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311533 5265 Fabidae View MSA
124062366 5270 Rosid View MSA
123744247 5271 Pentapetalae View MSA
122790743 5272 Eudicot View MSA
122042144 5273 Angiosperm View MSA
121349998 5274 Embryophyte View MSA
123381535 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 44.7557 0.0 118.984 High High
cufflinks 15.8137 0.0 41.0401    
cufflinks 24.9678 0.0 64.629    
cufflinks 17.7176 0.0 45.9023    
cufflinks 17.549 0.0 45.4808    
cufflinks 15.5952 0.0 40.476    
cufflinks 22.7725 0.0 58.8799    
cufflinks 17.2373 0.0 44.6211    
cufflinks 26.8151 0.0 69.4718    
cufflinks 20.7337 0.0 53.5958    
cufflinks 14.6476 0.0 38.1561   Low

0 Strain