Gene : Phvul.009G167700 P. vulgaris v2.1
Defline:  (1 of 2) PTHR24096:SF251 - 4-COUMARATE--COA LIGASE-LIKE 9 Genomic Order:  1718
Name:  ? Phvul.009G167700 Secondary Identifier:  ? PAC:37151389
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G167700 0.5kb upstream 0.5kb upstream 4181 true Chr09: 24936917-24941097 Phaseolus vulgaris
Phvul.009G167700 0.5kb upstream 0.5kb upstream 500 false Chr09: 24936917-24937416 Phaseolus vulgaris
Phvul.009G167700 0.5kb downstream 0.5kb downstream 4181 true Chr09: 24937417-24941597 Phaseolus vulgaris
Phvul.009G167700 0.5kb downstream 0.5kb downstream 500 false Chr09: 24941098-24941597 Phaseolus vulgaris
Phvul.009G167700 1.0kb upstream 1.0kb upstream 4681 true Chr09: 24936417-24941097 Phaseolus vulgaris
Phvul.009G167700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 24936417-24937416 Phaseolus vulgaris
Phvul.009G167700 1.0kb downstream 1.0kb downstream 4681 true Chr09: 24937417-24942097 Phaseolus vulgaris
Phvul.009G167700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 24941098-24942097 Phaseolus vulgaris
Phvul.009G167700 2.0kb upstream 2.0kb upstream 5681 true Chr09: 24935417-24941097 Phaseolus vulgaris
Phvul.009G167700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 24935417-24937416 Phaseolus vulgaris
Phvul.009G167700 2.0kb downstream 2.0kb downstream 5681 true Chr09: 24937417-24943097 Phaseolus vulgaris
Phvul.009G167700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 24941098-24943097 Phaseolus vulgaris
Phvul.009G167700 5.0kb upstream 5.0kb upstream 8681 true Chr09: 24932417-24941097 Phaseolus vulgaris
Phvul.009G167700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 24932417-24937416 Phaseolus vulgaris
Phvul.009G167700 5.0kb downstream 5.0kb downstream 8681 true Chr09: 24937417-24946097 Phaseolus vulgaris
Phvul.009G167700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 24941098-24946097 Phaseolus vulgaris
Phvul.009G167700 10.0kb upstream 10.0kb upstream 13681 true Chr09: 24927417-24941097 Phaseolus vulgaris
Phvul.009G167700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 24927417-24937416 Phaseolus vulgaris
Phvul.009G167700 10.0kb downstream 10.0kb downstream 13681 true Chr09: 24937417-24951097 Phaseolus vulgaris
Phvul.009G167700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 24941098-24951097 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304727 5265 Fabidae View MSA
124071918 5270 Rosid View MSA
123745043 5271 Pentapetalae View MSA
122795708 5272 Eudicot View MSA
122045138 5273 Angiosperm View MSA
121310405 5274 Embryophyte View MSA
123347895 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.4798 0.0 55.5345    
cufflinks 17.2591 0.0 44.6604    
cufflinks 27.3694 0.0 71.0059    
cufflinks 44.7843 0.0 119.846 High High
cufflinks 12.565 0.0 32.7749    
cufflinks 26.6505 0.0 69.1323    
cufflinks 15.2494 0.0 39.4893    
cufflinks 10.6327 0.0 27.9747   Low
cufflinks 8.19676 0.0 21.8934   Low
cufflinks 33.9754 0.0 88.909   High
cufflinks 22.4696 0.0 58.1347    

0 Strain