Gene : Phvul.008G029100 P. vulgaris v2.1
Defline:  (1 of 4) PTHR31673:SF3 - COBRA-LIKE EXTRACELLULAR GLYCOSYL-PHOSPHATIDYL INOSITOL-ANCHORED FAMILY PROTEIN-RELATED Genomic Order:  298
Name:  ? Phvul.008G029100 Secondary Identifier:  ? PAC:37161391
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G029100 0.5kb upstream 0.5kb upstream 4210 true Chr08: 2341375-2345584 Phaseolus vulgaris
Phvul.008G029100 0.5kb upstream 0.5kb upstream 500 false Chr08: 2345085-2345584 Phaseolus vulgaris
Phvul.008G029100 0.5kb downstream 0.5kb downstream 4210 true Chr08: 2340875-2345084 Phaseolus vulgaris
Phvul.008G029100 0.5kb downstream 0.5kb downstream 500 false Chr08: 2340875-2341374 Phaseolus vulgaris
Phvul.008G029100 1.0kb upstream 1.0kb upstream 4710 true Chr08: 2341375-2346084 Phaseolus vulgaris
Phvul.008G029100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 2345085-2346084 Phaseolus vulgaris
Phvul.008G029100 1.0kb downstream 1.0kb downstream 4710 true Chr08: 2340375-2345084 Phaseolus vulgaris
Phvul.008G029100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 2340375-2341374 Phaseolus vulgaris
Phvul.008G029100 2.0kb upstream 2.0kb upstream 5710 true Chr08: 2341375-2347084 Phaseolus vulgaris
Phvul.008G029100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 2345085-2347084 Phaseolus vulgaris
Phvul.008G029100 2.0kb downstream 2.0kb downstream 5710 true Chr08: 2339375-2345084 Phaseolus vulgaris
Phvul.008G029100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 2339375-2341374 Phaseolus vulgaris
Phvul.008G029100 5.0kb upstream 5.0kb upstream 8710 true Chr08: 2341375-2350084 Phaseolus vulgaris
Phvul.008G029100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 2345085-2350084 Phaseolus vulgaris
Phvul.008G029100 5.0kb downstream 5.0kb downstream 8710 true Chr08: 2336375-2345084 Phaseolus vulgaris
Phvul.008G029100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 2336375-2341374 Phaseolus vulgaris
Phvul.008G029100 10.0kb upstream 10.0kb upstream 13710 true Chr08: 2341375-2355084 Phaseolus vulgaris
Phvul.008G029100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 2345085-2355084 Phaseolus vulgaris
Phvul.008G029100 10.0kb downstream 10.0kb downstream 13710 true Chr08: 2331375-2345084 Phaseolus vulgaris
Phvul.008G029100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 2331375-2341374 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311980 5265 Fabidae View MSA
124062933 5270 Rosid View MSA
123750183 5271 Pentapetalae View MSA
122789403 5272 Eudicot View MSA
122044037 5273 Angiosperm View MSA
121349086 5274 Embryophyte View MSA
123381159 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.90488 0.0 24.8502   Low
cufflinks 14.1591 0.0 47.7084    
cufflinks 33.2559 0.0 112.15    
cufflinks 24.0238 0.0 77.3869    
cufflinks 23.2931 0.0 77.6438    
cufflinks 29.0372 0.0 81.1395    
cufflinks 53.3384 0.0 181.098 High High
cufflinks 45.3821 0.0 151.871 High  
cufflinks 83.6205 0.0 343.141 High High
cufflinks 16.3401 0.0 46.7606    
cufflinks 27.1041 0.0 100.379    

0 Strain