Gene : Phvul.008G041600 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10759//PTHR10759:SF1 - 60S RIBOSOMAL PROTEIN L34 // SUBFAMILY NOT NAMED Genomic Order:  430
Name:  ? Phvul.008G041600 Secondary Identifier:  ? PAC:37159608
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G041600 0.5kb upstream 0.5kb upstream 4708 true Chr08: 3517565-3522272 Phaseolus vulgaris
Phvul.008G041600 0.5kb upstream 0.5kb upstream 500 false Chr08: 3517565-3518064 Phaseolus vulgaris
Phvul.008G041600 0.5kb downstream 0.5kb downstream 4708 true Chr08: 3518065-3522772 Phaseolus vulgaris
Phvul.008G041600 0.5kb downstream 0.5kb downstream 500 false Chr08: 3522273-3522772 Phaseolus vulgaris
Phvul.008G041600 1.0kb upstream 1.0kb upstream 5208 true Chr08: 3517065-3522272 Phaseolus vulgaris
Phvul.008G041600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 3517065-3518064 Phaseolus vulgaris
Phvul.008G041600 1.0kb downstream 1.0kb downstream 5208 true Chr08: 3518065-3523272 Phaseolus vulgaris
Phvul.008G041600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 3522273-3523272 Phaseolus vulgaris
Phvul.008G041600 2.0kb upstream 2.0kb upstream 6208 true Chr08: 3516065-3522272 Phaseolus vulgaris
Phvul.008G041600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 3516065-3518064 Phaseolus vulgaris
Phvul.008G041600 2.0kb downstream 2.0kb downstream 6208 true Chr08: 3518065-3524272 Phaseolus vulgaris
Phvul.008G041600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 3522273-3524272 Phaseolus vulgaris
Phvul.008G041600 5.0kb upstream 5.0kb upstream 9208 true Chr08: 3513065-3522272 Phaseolus vulgaris
Phvul.008G041600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 3513065-3518064 Phaseolus vulgaris
Phvul.008G041600 5.0kb downstream 5.0kb downstream 9208 true Chr08: 3518065-3527272 Phaseolus vulgaris
Phvul.008G041600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 3522273-3527272 Phaseolus vulgaris
Phvul.008G041600 10.0kb upstream 10.0kb upstream 14208 true Chr08: 3508065-3522272 Phaseolus vulgaris
Phvul.008G041600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 3508065-3518064 Phaseolus vulgaris
Phvul.008G041600 10.0kb downstream 10.0kb downstream 14208 true Chr08: 3518065-3532272 Phaseolus vulgaris
Phvul.008G041600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 3522273-3532272 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299973 5265 Fabidae View MSA
124067666 5270 Rosid View MSA
123750813 5271 Pentapetalae View MSA
122794318 5272 Eudicot View MSA
122048294 5273 Angiosperm View MSA
121310920 5274 Embryophyte View MSA
123348292 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.814489 0.0 2.72087   Low
cufflinks 0.457661 0.0 1.63365 Low Low
cufflinks 2.91248 0.0 8.41166    
cufflinks 1.4647 0.0 4.64182    
cufflinks 2.87326 0.0 8.4546    
cufflinks 4.16989 0.0 11.6674   High
cufflinks 4.25642 0.0 11.89   High
cufflinks 1.86393 0.0 5.64599    
cufflinks 1.89917 0.0 5.80256    
cufflinks 1.98423 0.0 6.02894    
cufflinks 4.32039 0.0 12.1344   High

0 Strain