Gene : Phvul.008G042800 P. vulgaris v2.1
Defline:  (1 of 1) 1.1.3.30 - Polyvinyl-alcohol oxidase / PVA oxidase Genomic Order:  443
Name:  ? Phvul.008G042800 Secondary Identifier:  ? PAC:37159712
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-6464 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G042800 0.5kb upstream 0.5kb upstream 2943 true Chr08: 3656770-3659712 Phaseolus vulgaris
Phvul.008G042800 0.5kb upstream 0.5kb upstream 500 false Chr08: 3656770-3657269 Phaseolus vulgaris
Phvul.008G042800 0.5kb downstream 0.5kb downstream 2943 true Chr08: 3657270-3660212 Phaseolus vulgaris
Phvul.008G042800 0.5kb downstream 0.5kb downstream 500 false Chr08: 3659713-3660212 Phaseolus vulgaris
Phvul.008G042800 1.0kb upstream 1.0kb upstream 3443 true Chr08: 3656270-3659712 Phaseolus vulgaris
Phvul.008G042800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 3656270-3657269 Phaseolus vulgaris
Phvul.008G042800 1.0kb downstream 1.0kb downstream 3443 true Chr08: 3657270-3660712 Phaseolus vulgaris
Phvul.008G042800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 3659713-3660712 Phaseolus vulgaris
Phvul.008G042800 2.0kb upstream 2.0kb upstream 4443 true Chr08: 3655270-3659712 Phaseolus vulgaris
Phvul.008G042800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 3655270-3657269 Phaseolus vulgaris
Phvul.008G042800 2.0kb downstream 2.0kb downstream 4443 true Chr08: 3657270-3661712 Phaseolus vulgaris
Phvul.008G042800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 3659713-3661712 Phaseolus vulgaris
Phvul.008G042800 5.0kb upstream 5.0kb upstream 7443 true Chr08: 3652270-3659712 Phaseolus vulgaris
Phvul.008G042800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 3652270-3657269 Phaseolus vulgaris
Phvul.008G042800 5.0kb downstream 5.0kb downstream 7443 true Chr08: 3657270-3664712 Phaseolus vulgaris
Phvul.008G042800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 3659713-3664712 Phaseolus vulgaris
Phvul.008G042800 10.0kb upstream 10.0kb upstream 12443 true Chr08: 3647270-3659712 Phaseolus vulgaris
Phvul.008G042800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 3647270-3657269 Phaseolus vulgaris
Phvul.008G042800 10.0kb downstream 10.0kb downstream 12443 true Chr08: 3657270-3669712 Phaseolus vulgaris
Phvul.008G042800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 3659713-3669712 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121617864 5273 Angiosperm View MSA
122254338 5265 Fabidae View MSA
123996542 5270 Rosid View MSA
123570991 5271 Pentapetalae View MSA
122605724 5272 Eudicot View MSA
121349158 5274 Embryophyte View MSA
123425868 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0377629 0.0 0.173818 Low  
cufflinks 0.0349748 0.0 0.162136 Low  
cufflinks 0.0957455 0.0 0.402006 Low  
cufflinks 0.0359579 0.0 0.167029 Low  
cufflinks 0.228383 0.0 0.899196 Low High
cufflinks 0.0719064 0.0 0.31027 Low  
cufflinks 0.041124 0.0 0.187237 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0222662 0.0 0.10815 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.308755 0.0 1.18594 Low High

0 Strain