Gene : Phvul.008G019800 P. vulgaris v2.1
Defline:  (1 of 2) K02908 - large subunit ribosomal protein L30e (RP-L30e, RPL30) Genomic Order:  199
Name:  ? Phvul.008G019800 Secondary Identifier:  ? PAC:37157854
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G019800 0.5kb upstream 0.5kb upstream 2142 true Chr08: 1656036-1658177 Phaseolus vulgaris
Phvul.008G019800 0.5kb upstream 0.5kb upstream 500 false Chr08: 1656036-1656535 Phaseolus vulgaris
Phvul.008G019800 0.5kb downstream 0.5kb downstream 2142 true Chr08: 1656536-1658677 Phaseolus vulgaris
Phvul.008G019800 0.5kb downstream 0.5kb downstream 500 false Chr08: 1658178-1658677 Phaseolus vulgaris
Phvul.008G019800 1.0kb upstream 1.0kb upstream 2642 true Chr08: 1655536-1658177 Phaseolus vulgaris
Phvul.008G019800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 1655536-1656535 Phaseolus vulgaris
Phvul.008G019800 1.0kb downstream 1.0kb downstream 2642 true Chr08: 1656536-1659177 Phaseolus vulgaris
Phvul.008G019800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 1658178-1659177 Phaseolus vulgaris
Phvul.008G019800 2.0kb upstream 2.0kb upstream 3642 true Chr08: 1654536-1658177 Phaseolus vulgaris
Phvul.008G019800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 1654536-1656535 Phaseolus vulgaris
Phvul.008G019800 2.0kb downstream 2.0kb downstream 3642 true Chr08: 1656536-1660177 Phaseolus vulgaris
Phvul.008G019800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 1658178-1660177 Phaseolus vulgaris
Phvul.008G019800 5.0kb upstream 5.0kb upstream 6642 true Chr08: 1651536-1658177 Phaseolus vulgaris
Phvul.008G019800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 1651536-1656535 Phaseolus vulgaris
Phvul.008G019800 5.0kb downstream 5.0kb downstream 6642 true Chr08: 1656536-1663177 Phaseolus vulgaris
Phvul.008G019800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 1658178-1663177 Phaseolus vulgaris
Phvul.008G019800 10.0kb upstream 10.0kb upstream 11642 true Chr08: 1646536-1658177 Phaseolus vulgaris
Phvul.008G019800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 1646536-1656535 Phaseolus vulgaris
Phvul.008G019800 10.0kb downstream 10.0kb downstream 11642 true Chr08: 1656536-1668177 Phaseolus vulgaris
Phvul.008G019800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 1658178-1668177 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314746 5265 Fabidae View MSA
124064182 5270 Rosid View MSA
123750614 5271 Pentapetalae View MSA
122788206 5272 Eudicot View MSA
122051684 5273 Angiosperm View MSA
121344063 5274 Embryophyte View MSA
123425041 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 169.494 0.0 443.929 High  
cufflinks 250.55 0.0 674.531 High High
cufflinks 122.469 0.0 317.28 High  
cufflinks 246.417 0.0 663.23 High High
cufflinks 157.892 0.0 411.19 High  
cufflinks 137.673 0.0 357.67 High  
cufflinks 141.39 0.0 367.672 High  
cufflinks 215.167 0.0 572.35 High  
cufflinks 184.93 0.0 487.208 High  
cufflinks 73.2613 0.0 190.341 High Low
cufflinks 159.859 0.0 416.968 High  

0 Strain