Gene : Phvul.008G022500 P. vulgaris v2.1
Defline:  (1 of 31) PF08659 - KR domain (KR) Genomic Order:  228
Name:  ? Phvul.008G022500 Secondary Identifier:  ? PAC:37159037
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5466 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G022500 0.5kb upstream 0.5kb upstream 1709 true Chr08: 1852539-1854247 Phaseolus vulgaris
Phvul.008G022500 0.5kb upstream 0.5kb upstream 500 false Chr08: 1853748-1854247 Phaseolus vulgaris
Phvul.008G022500 0.5kb downstream 0.5kb downstream 1709 true Chr08: 1852039-1853747 Phaseolus vulgaris
Phvul.008G022500 0.5kb downstream 0.5kb downstream 500 false Chr08: 1852039-1852538 Phaseolus vulgaris
Phvul.008G022500 1.0kb upstream 1.0kb upstream 2209 true Chr08: 1852539-1854747 Phaseolus vulgaris
Phvul.008G022500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 1853748-1854747 Phaseolus vulgaris
Phvul.008G022500 1.0kb downstream 1.0kb downstream 2209 true Chr08: 1851539-1853747 Phaseolus vulgaris
Phvul.008G022500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 1851539-1852538 Phaseolus vulgaris
Phvul.008G022500 2.0kb upstream 2.0kb upstream 3209 true Chr08: 1852539-1855747 Phaseolus vulgaris
Phvul.008G022500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 1853748-1855747 Phaseolus vulgaris
Phvul.008G022500 2.0kb downstream 2.0kb downstream 3209 true Chr08: 1850539-1853747 Phaseolus vulgaris
Phvul.008G022500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 1850539-1852538 Phaseolus vulgaris
Phvul.008G022500 5.0kb upstream 5.0kb upstream 6209 true Chr08: 1852539-1858747 Phaseolus vulgaris
Phvul.008G022500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 1853748-1858747 Phaseolus vulgaris
Phvul.008G022500 5.0kb downstream 5.0kb downstream 6209 true Chr08: 1847539-1853747 Phaseolus vulgaris
Phvul.008G022500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 1847539-1852538 Phaseolus vulgaris
Phvul.008G022500 10.0kb upstream 10.0kb upstream 11209 true Chr08: 1852539-1863747 Phaseolus vulgaris
Phvul.008G022500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 1853748-1863747 Phaseolus vulgaris
Phvul.008G022500 10.0kb downstream 10.0kb downstream 11209 true Chr08: 1842539-1853747 Phaseolus vulgaris
Phvul.008G022500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 1842539-1852538 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304604 5265 Fabidae View MSA
124061755 5270 Rosid View MSA
123748267 5271 Pentapetalae View MSA
122788265 5272 Eudicot View MSA
122042997 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121351668 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0396249 0.0 0.196381 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0754101 0.0 0.350291 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain