Gene : Phvul.008G012400 P. vulgaris v2.1
Defline:  (1 of 19) PF01985 - CRS1 / YhbY (CRM) domain (CRS1_YhbY) Genomic Order:  124
Name:  ? Phvul.008G012400 Secondary Identifier:  ? PAC:37161050
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G012400 0.5kb upstream 0.5kb upstream 4535 true Chr08: 1021883-1026417 Phaseolus vulgaris
Phvul.008G012400 0.5kb upstream 0.5kb upstream 500 false Chr08: 1025918-1026417 Phaseolus vulgaris
Phvul.008G012400 0.5kb downstream 0.5kb downstream 4535 true Chr08: 1021383-1025917 Phaseolus vulgaris
Phvul.008G012400 0.5kb downstream 0.5kb downstream 500 false Chr08: 1021383-1021882 Phaseolus vulgaris
Phvul.008G012400 1.0kb upstream 1.0kb upstream 5035 true Chr08: 1021883-1026917 Phaseolus vulgaris
Phvul.008G012400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 1025918-1026917 Phaseolus vulgaris
Phvul.008G012400 1.0kb downstream 1.0kb downstream 5035 true Chr08: 1020883-1025917 Phaseolus vulgaris
Phvul.008G012400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 1020883-1021882 Phaseolus vulgaris
Phvul.008G012400 2.0kb upstream 2.0kb upstream 6035 true Chr08: 1021883-1027917 Phaseolus vulgaris
Phvul.008G012400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 1025918-1027917 Phaseolus vulgaris
Phvul.008G012400 2.0kb downstream 2.0kb downstream 6035 true Chr08: 1019883-1025917 Phaseolus vulgaris
Phvul.008G012400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 1019883-1021882 Phaseolus vulgaris
Phvul.008G012400 5.0kb upstream 5.0kb upstream 9035 true Chr08: 1021883-1030917 Phaseolus vulgaris
Phvul.008G012400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 1025918-1030917 Phaseolus vulgaris
Phvul.008G012400 5.0kb downstream 5.0kb downstream 9035 true Chr08: 1016883-1025917 Phaseolus vulgaris
Phvul.008G012400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 1016883-1021882 Phaseolus vulgaris
Phvul.008G012400 10.0kb upstream 10.0kb upstream 14035 true Chr08: 1021883-1035917 Phaseolus vulgaris
Phvul.008G012400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 1025918-1035917 Phaseolus vulgaris
Phvul.008G012400 10.0kb downstream 10.0kb downstream 14035 true Chr08: 1011883-1025917 Phaseolus vulgaris
Phvul.008G012400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 1011883-1021882 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301206 5265 Fabidae View MSA
124060535 5270 Rosid View MSA
123737777 5271 Pentapetalae View MSA
122788022 5272 Eudicot View MSA
122049520 5273 Angiosperm View MSA
121350560 5274 Embryophyte View MSA
123381792 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.0848 0.0 10.8843   Low
cufflinks 4.79941 0.0 24.8437    
cufflinks 9.02954 0.0 31.5743    
cufflinks 4.4969 0.0 20.0924    
cufflinks 5.33999 0.0 22.4197    
cufflinks 10.3162 0.0 33.7027   High
cufflinks 6.71525 0.0 20.5469    
cufflinks 9.42757 0.0 41.1169   High
cufflinks 4.7064 0.0 27.4345    
cufflinks 9.34937 0.0 38.109   High
cufflinks 4.71208 0.0 19.8486    

0 Strain