Gene : Phvul.008G016000 P. vulgaris v2.1
Defline:  (1 of 3) PTHR21726:SF49 - PHOSPHATIDYLINOSITOL N-ACETYGLUCOSAMINLYTRANSFERASE SUBUNIT P-LIKE PROTEIN Genomic Order:  161
Name:  ? Phvul.008G016000 Secondary Identifier:  ? PAC:37158382
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G016000 0.5kb upstream 0.5kb upstream 5063 true Chr08: 1313459-1318521 Phaseolus vulgaris
Phvul.008G016000 0.5kb upstream 0.5kb upstream 500 false Chr08: 1318022-1318521 Phaseolus vulgaris
Phvul.008G016000 0.5kb downstream 0.5kb downstream 5063 true Chr08: 1312959-1318021 Phaseolus vulgaris
Phvul.008G016000 0.5kb downstream 0.5kb downstream 500 false Chr08: 1312959-1313458 Phaseolus vulgaris
Phvul.008G016000 1.0kb upstream 1.0kb upstream 5563 true Chr08: 1313459-1319021 Phaseolus vulgaris
Phvul.008G016000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 1318022-1319021 Phaseolus vulgaris
Phvul.008G016000 1.0kb downstream 1.0kb downstream 5563 true Chr08: 1312459-1318021 Phaseolus vulgaris
Phvul.008G016000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 1312459-1313458 Phaseolus vulgaris
Phvul.008G016000 2.0kb upstream 2.0kb upstream 6563 true Chr08: 1313459-1320021 Phaseolus vulgaris
Phvul.008G016000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 1318022-1320021 Phaseolus vulgaris
Phvul.008G016000 2.0kb downstream 2.0kb downstream 6563 true Chr08: 1311459-1318021 Phaseolus vulgaris
Phvul.008G016000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 1311459-1313458 Phaseolus vulgaris
Phvul.008G016000 5.0kb upstream 5.0kb upstream 9563 true Chr08: 1313459-1323021 Phaseolus vulgaris
Phvul.008G016000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 1318022-1323021 Phaseolus vulgaris
Phvul.008G016000 5.0kb downstream 5.0kb downstream 9563 true Chr08: 1308459-1318021 Phaseolus vulgaris
Phvul.008G016000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 1308459-1313458 Phaseolus vulgaris
Phvul.008G016000 10.0kb upstream 10.0kb upstream 14563 true Chr08: 1313459-1328021 Phaseolus vulgaris
Phvul.008G016000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 1318022-1328021 Phaseolus vulgaris
Phvul.008G016000 10.0kb downstream 10.0kb downstream 14563 true Chr08: 1303459-1318021 Phaseolus vulgaris
Phvul.008G016000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 1303459-1313458 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312094 5265 Fabidae View MSA
124070325 5270 Rosid View MSA
123752658 5271 Pentapetalae View MSA
122796149 5272 Eudicot View MSA
122047925 5273 Angiosperm View MSA
121350314 5274 Embryophyte View MSA
123381675 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.15557 0.0 13.1211    
cufflinks 1.46208 0.0 6.48746    
cufflinks 3.63614 0.0 14.3842    
cufflinks 1.23133 0.0 6.03257   Low
cufflinks 2.02985 0.0 8.39403    
cufflinks 0.982266 0.0 3.68441   Low
cufflinks 3.39113 0.0 13.9757    
cufflinks 1.94409 0.0 9.45869    
cufflinks 3.7105 0.0 15.0312    
cufflinks 4.8488 0.0 18.6483   High
cufflinks 1.36114 0.0 4.78292    

0 Strain