Gene : Phvul.008G015900 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31871:SF10 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K5K13 Genomic Order:  160
Name:  ? Phvul.008G015900 Secondary Identifier:  ? PAC:37157675
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G015900 0.5kb upstream 0.5kb upstream 2211 true Chr08: 1306125-1308335 Phaseolus vulgaris
Phvul.008G015900 0.5kb upstream 0.5kb upstream 500 false Chr08: 1306125-1306624 Phaseolus vulgaris
Phvul.008G015900 0.5kb downstream 0.5kb downstream 2211 true Chr08: 1306625-1308835 Phaseolus vulgaris
Phvul.008G015900 0.5kb downstream 0.5kb downstream 500 false Chr08: 1308336-1308835 Phaseolus vulgaris
Phvul.008G015900 1.0kb upstream 1.0kb upstream 2711 true Chr08: 1305625-1308335 Phaseolus vulgaris
Phvul.008G015900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 1305625-1306624 Phaseolus vulgaris
Phvul.008G015900 1.0kb downstream 1.0kb downstream 2711 true Chr08: 1306625-1309335 Phaseolus vulgaris
Phvul.008G015900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 1308336-1309335 Phaseolus vulgaris
Phvul.008G015900 2.0kb upstream 2.0kb upstream 3711 true Chr08: 1304625-1308335 Phaseolus vulgaris
Phvul.008G015900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 1304625-1306624 Phaseolus vulgaris
Phvul.008G015900 2.0kb downstream 2.0kb downstream 3711 true Chr08: 1306625-1310335 Phaseolus vulgaris
Phvul.008G015900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 1308336-1310335 Phaseolus vulgaris
Phvul.008G015900 5.0kb upstream 5.0kb upstream 6711 true Chr08: 1301625-1308335 Phaseolus vulgaris
Phvul.008G015900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 1301625-1306624 Phaseolus vulgaris
Phvul.008G015900 5.0kb downstream 5.0kb downstream 6711 true Chr08: 1306625-1313335 Phaseolus vulgaris
Phvul.008G015900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 1308336-1313335 Phaseolus vulgaris
Phvul.008G015900 10.0kb upstream 10.0kb upstream 11711 true Chr08: 1296625-1308335 Phaseolus vulgaris
Phvul.008G015900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 1296625-1306624 Phaseolus vulgaris
Phvul.008G015900 10.0kb downstream 10.0kb downstream 11711 true Chr08: 1306625-1318335 Phaseolus vulgaris
Phvul.008G015900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 1308336-1318335 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314737 5265 Fabidae View MSA
124070789 5270 Rosid View MSA
123747492 5271 Pentapetalae View MSA
122795039 5272 Eudicot View MSA
122043868 5273 Angiosperm View MSA
121310203 5274 Embryophyte View MSA
123347760 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.68463 0.0 9.6413    
cufflinks 2.15167 0.0 7.86273    
cufflinks 39.2055 0.0 105.403 High High
cufflinks 1.49595 0.0 5.63727    
cufflinks 4.59928 0.0 15.73    
cufflinks 19.5996 0.0 56.1937   High
cufflinks 0.978317 0.0 3.80845    
cufflinks 0.485409 0.0 1.99726   Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.694417 0.0 2.79219   Low
cufflinks 4.19849 0.0 14.4049    

0 Strain