Gene : Phvul.008G037000 P. vulgaris v2.1
Defline:  (1 of 7) PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Genomic Order:  384
Name:  ? Phvul.008G037000 Secondary Identifier:  ? PAC:37161127
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G037000 0.5kb upstream 0.5kb upstream 4271 true Chr08: 3043255-3047525 Phaseolus vulgaris
Phvul.008G037000 0.5kb upstream 0.5kb upstream 500 false Chr08: 3043255-3043754 Phaseolus vulgaris
Phvul.008G037000 0.5kb downstream 0.5kb downstream 4271 true Chr08: 3043755-3048025 Phaseolus vulgaris
Phvul.008G037000 0.5kb downstream 0.5kb downstream 500 false Chr08: 3047526-3048025 Phaseolus vulgaris
Phvul.008G037000 1.0kb upstream 1.0kb upstream 4771 true Chr08: 3042755-3047525 Phaseolus vulgaris
Phvul.008G037000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 3042755-3043754 Phaseolus vulgaris
Phvul.008G037000 1.0kb downstream 1.0kb downstream 4771 true Chr08: 3043755-3048525 Phaseolus vulgaris
Phvul.008G037000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 3047526-3048525 Phaseolus vulgaris
Phvul.008G037000 2.0kb upstream 2.0kb upstream 5771 true Chr08: 3041755-3047525 Phaseolus vulgaris
Phvul.008G037000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 3041755-3043754 Phaseolus vulgaris
Phvul.008G037000 2.0kb downstream 2.0kb downstream 5771 true Chr08: 3043755-3049525 Phaseolus vulgaris
Phvul.008G037000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 3047526-3049525 Phaseolus vulgaris
Phvul.008G037000 5.0kb upstream 5.0kb upstream 8771 true Chr08: 3038755-3047525 Phaseolus vulgaris
Phvul.008G037000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 3038755-3043754 Phaseolus vulgaris
Phvul.008G037000 5.0kb downstream 5.0kb downstream 8771 true Chr08: 3043755-3052525 Phaseolus vulgaris
Phvul.008G037000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 3047526-3052525 Phaseolus vulgaris
Phvul.008G037000 10.0kb upstream 10.0kb upstream 13771 true Chr08: 3033755-3047525 Phaseolus vulgaris
Phvul.008G037000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 3033755-3043754 Phaseolus vulgaris
Phvul.008G037000 10.0kb downstream 10.0kb downstream 13771 true Chr08: 3043755-3057525 Phaseolus vulgaris
Phvul.008G037000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 3047526-3057525 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304560 5265 Fabidae View MSA
124066324 5270 Rosid View MSA
123751425 5271 Pentapetalae View MSA
122791287 5272 Eudicot View MSA
122048139 5273 Angiosperm View MSA
121349903 5274 Embryophyte View MSA
123427226 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.7503 0.0 5.43784    
cufflinks 1.34453 0.0 4.3153    
cufflinks 0.970883 0.0 3.22298   Low
cufflinks 0.881285 0.0 2.96921   Low
cufflinks 2.0994 0.0 6.42044    
cufflinks 2.46053 0.0 7.36113    
cufflinks 4.44737 0.0 12.4593   High
cufflinks 5.67307 0.0 15.5399   High
cufflinks 3.2435 0.0 9.37084    
cufflinks 0.934138 0.0 3.12892   Low
cufflinks 3.11283 0.0 9.10476    

0 Strain