Gene : Phvul.008G004400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11695//PTHR11695:SF564 - ALCOHOL DEHYDROGENASE RELATED // SUBFAMILY NOT NAMED Genomic Order:  45
Name:  ? Phvul.008G004400 Secondary Identifier:  ? PAC:37157789
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G004400 0.5kb upstream 0.5kb upstream 4026 true Chr08: 400988-405013 Phaseolus vulgaris
Phvul.008G004400 0.5kb upstream 0.5kb upstream 500 false Chr08: 404514-405013 Phaseolus vulgaris
Phvul.008G004400 0.5kb downstream 0.5kb downstream 4026 true Chr08: 400488-404513 Phaseolus vulgaris
Phvul.008G004400 0.5kb downstream 0.5kb downstream 500 false Chr08: 400488-400987 Phaseolus vulgaris
Phvul.008G004400 1.0kb upstream 1.0kb upstream 4526 true Chr08: 400988-405513 Phaseolus vulgaris
Phvul.008G004400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 404514-405513 Phaseolus vulgaris
Phvul.008G004400 1.0kb downstream 1.0kb downstream 4526 true Chr08: 399988-404513 Phaseolus vulgaris
Phvul.008G004400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 399988-400987 Phaseolus vulgaris
Phvul.008G004400 2.0kb upstream 2.0kb upstream 5526 true Chr08: 400988-406513 Phaseolus vulgaris
Phvul.008G004400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 404514-406513 Phaseolus vulgaris
Phvul.008G004400 2.0kb downstream 2.0kb downstream 5526 true Chr08: 398988-404513 Phaseolus vulgaris
Phvul.008G004400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 398988-400987 Phaseolus vulgaris
Phvul.008G004400 5.0kb upstream 5.0kb upstream 8526 true Chr08: 400988-409513 Phaseolus vulgaris
Phvul.008G004400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 404514-409513 Phaseolus vulgaris
Phvul.008G004400 5.0kb downstream 5.0kb downstream 8526 true Chr08: 395988-404513 Phaseolus vulgaris
Phvul.008G004400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 395988-400987 Phaseolus vulgaris
Phvul.008G004400 10.0kb upstream 10.0kb upstream 13526 true Chr08: 400988-414513 Phaseolus vulgaris
Phvul.008G004400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 404514-414513 Phaseolus vulgaris
Phvul.008G004400 10.0kb downstream 10.0kb downstream 13526 true Chr08: 390988-404513 Phaseolus vulgaris
Phvul.008G004400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 390988-400987 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300538 5265 Fabidae View MSA
124065367 5270 Rosid View MSA
123739652 5271 Pentapetalae View MSA
122790744 5272 Eudicot View MSA
122046784 5273 Angiosperm View MSA
121350474 5274 Embryophyte View MSA
123428381 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.2216 0.0 60.4744    
cufflinks 20.9046 0.0 54.7097    
cufflinks 20.3956 0.0 53.3831    
cufflinks 40.1546 0.0 103.828 High High
cufflinks 20.4874 0.0 53.785    
cufflinks 37.6709 0.0 97.3897 High High
cufflinks 14.8471 0.0 39.7403    
cufflinks 12.6793 0.0 34.274   Low
cufflinks 19.2361 0.0 50.6716    
cufflinks 9.76153 0.0 27.0355   Low
cufflinks 26.9467 0.0 69.931    

0 Strain