Gene : Phvul.008G005300 P. vulgaris v2.1
Defline:  (1 of 5) 2.5.1.112//2.5.1.27 - Adenylate dimethylallyltransferase (ADP/ATP-dependent) / Isopentenyltransferase // Adenylate dimethylallyltransferase (AMP-dependent) / Isopentenyltransferase Genomic Order:  54
Name:  ? Phvul.008G005300 Secondary Identifier:  ? PAC:37161104
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-2681 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G005300 0.5kb upstream 0.5kb upstream 2196 true Chr08: 492194-494389 Phaseolus vulgaris
Phvul.008G005300 0.5kb upstream 0.5kb upstream 500 false Chr08: 493890-494389 Phaseolus vulgaris
Phvul.008G005300 0.5kb downstream 0.5kb downstream 2196 true Chr08: 491694-493889 Phaseolus vulgaris
Phvul.008G005300 0.5kb downstream 0.5kb downstream 500 false Chr08: 491694-492193 Phaseolus vulgaris
Phvul.008G005300 1.0kb upstream 1.0kb upstream 2696 true Chr08: 492194-494889 Phaseolus vulgaris
Phvul.008G005300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 493890-494889 Phaseolus vulgaris
Phvul.008G005300 1.0kb downstream 1.0kb downstream 2696 true Chr08: 491194-493889 Phaseolus vulgaris
Phvul.008G005300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 491194-492193 Phaseolus vulgaris
Phvul.008G005300 2.0kb upstream 2.0kb upstream 3696 true Chr08: 492194-495889 Phaseolus vulgaris
Phvul.008G005300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 493890-495889 Phaseolus vulgaris
Phvul.008G005300 2.0kb downstream 2.0kb downstream 3696 true Chr08: 490194-493889 Phaseolus vulgaris
Phvul.008G005300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 490194-492193 Phaseolus vulgaris
Phvul.008G005300 5.0kb upstream 5.0kb upstream 6696 true Chr08: 492194-498889 Phaseolus vulgaris
Phvul.008G005300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 493890-498889 Phaseolus vulgaris
Phvul.008G005300 5.0kb downstream 5.0kb downstream 6696 true Chr08: 487194-493889 Phaseolus vulgaris
Phvul.008G005300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 487194-492193 Phaseolus vulgaris
Phvul.008G005300 10.0kb upstream 10.0kb upstream 11696 true Chr08: 492194-503889 Phaseolus vulgaris
Phvul.008G005300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 493890-503889 Phaseolus vulgaris
Phvul.008G005300 10.0kb downstream 10.0kb downstream 11696 true Chr08: 482194-493889 Phaseolus vulgaris
Phvul.008G005300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 482194-492193 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303429 5265 Fabidae View MSA
124050703 5270 Rosid View MSA
123755312 5271 Pentapetalae View MSA
122796048 5272 Eudicot View MSA
122042275 5273 Angiosperm View MSA
121309945 5274 Embryophyte View MSA
123428607 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0370227 0.0 0.183485 Low  
cufflinks 13.9998 0.0 38.9234    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain