Gene : Phvul.009G238300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11122//PTHR11122:SF22 - APOSPORY-ASSOCIATED PROTEIN C-RELATED // SUBFAMILY NOT NAMED Genomic Order:  2431
Name:  ? Phvul.009G238300 Secondary Identifier:  ? PAC:37148640
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G238300 0.5kb upstream 0.5kb upstream 7488 true Chr09: 35700648-35708135 Phaseolus vulgaris
Phvul.009G238300 0.5kb upstream 0.5kb upstream 500 false Chr09: 35700648-35701147 Phaseolus vulgaris
Phvul.009G238300 0.5kb downstream 0.5kb downstream 7488 true Chr09: 35701148-35708635 Phaseolus vulgaris
Phvul.009G238300 0.5kb downstream 0.5kb downstream 500 false Chr09: 35708136-35708635 Phaseolus vulgaris
Phvul.009G238300 1.0kb upstream 1.0kb upstream 7988 true Chr09: 35700148-35708135 Phaseolus vulgaris
Phvul.009G238300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 35700148-35701147 Phaseolus vulgaris
Phvul.009G238300 1.0kb downstream 1.0kb downstream 7988 true Chr09: 35701148-35709135 Phaseolus vulgaris
Phvul.009G238300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 35708136-35709135 Phaseolus vulgaris
Phvul.009G238300 2.0kb upstream 2.0kb upstream 8988 true Chr09: 35699148-35708135 Phaseolus vulgaris
Phvul.009G238300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 35699148-35701147 Phaseolus vulgaris
Phvul.009G238300 2.0kb downstream 2.0kb downstream 8988 true Chr09: 35701148-35710135 Phaseolus vulgaris
Phvul.009G238300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 35708136-35710135 Phaseolus vulgaris
Phvul.009G238300 5.0kb upstream 5.0kb upstream 11988 true Chr09: 35696148-35708135 Phaseolus vulgaris
Phvul.009G238300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 35696148-35701147 Phaseolus vulgaris
Phvul.009G238300 5.0kb downstream 5.0kb downstream 11988 true Chr09: 35701148-35713135 Phaseolus vulgaris
Phvul.009G238300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 35708136-35713135 Phaseolus vulgaris
Phvul.009G238300 10.0kb upstream 10.0kb upstream 16988 true Chr09: 35691148-35708135 Phaseolus vulgaris
Phvul.009G238300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 35691148-35701147 Phaseolus vulgaris
Phvul.009G238300 10.0kb downstream 10.0kb downstream 16988 true Chr09: 35701148-35718135 Phaseolus vulgaris
Phvul.009G238300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 35708136-35718135 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305532 5265 Fabidae View MSA
124064506 5270 Rosid View MSA
123740956 5271 Pentapetalae View MSA
122787587 5272 Eudicot View MSA
122047038 5273 Angiosperm View MSA
121347358 5274 Embryophyte View MSA
123428689 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.3189 0.0 57.4033   Low
cufflinks 21.8843 0.0 62.5416    
cufflinks 21.6953 0.0 63.0266    
cufflinks 30.6975 0.0 86.9789   High
cufflinks 25.183 0.0 72.0477    
cufflinks 22.8458 0.0 72.7223    
cufflinks 23.1029 0.0 66.7792    
cufflinks 22.1174 0.0 64.0255    
cufflinks 28.1119 0.0 80.4222   High
cufflinks 23.067 0.0 66.4011    
cufflinks 30.1931 0.0 85.9666   High

0 Strain