Gene : Phvul.009G241800 P. vulgaris v2.1
Defline:  (1 of 6) K17686 - Cu+-exporting ATPase (copA, ATP7) Genomic Order:  2476
Name:  ? Phvul.009G241800 Secondary Identifier:  ? PAC:37151680
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G241800 0.5kb upstream 0.5kb upstream 7964 true Chr09: 36303929-36311892 Phaseolus vulgaris
Phvul.009G241800 0.5kb upstream 0.5kb upstream 500 false Chr09: 36303929-36304428 Phaseolus vulgaris
Phvul.009G241800 0.5kb downstream 0.5kb downstream 7964 true Chr09: 36304429-36312392 Phaseolus vulgaris
Phvul.009G241800 0.5kb downstream 0.5kb downstream 500 false Chr09: 36311893-36312392 Phaseolus vulgaris
Phvul.009G241800 1.0kb upstream 1.0kb upstream 8464 true Chr09: 36303429-36311892 Phaseolus vulgaris
Phvul.009G241800 1.0kb upstream 1.0kb upstream 1000 false Chr09: 36303429-36304428 Phaseolus vulgaris
Phvul.009G241800 1.0kb downstream 1.0kb downstream 8464 true Chr09: 36304429-36312892 Phaseolus vulgaris
Phvul.009G241800 1.0kb downstream 1.0kb downstream 1000 false Chr09: 36311893-36312892 Phaseolus vulgaris
Phvul.009G241800 2.0kb upstream 2.0kb upstream 9464 true Chr09: 36302429-36311892 Phaseolus vulgaris
Phvul.009G241800 2.0kb upstream 2.0kb upstream 2000 false Chr09: 36302429-36304428 Phaseolus vulgaris
Phvul.009G241800 2.0kb downstream 2.0kb downstream 9464 true Chr09: 36304429-36313892 Phaseolus vulgaris
Phvul.009G241800 2.0kb downstream 2.0kb downstream 2000 false Chr09: 36311893-36313892 Phaseolus vulgaris
Phvul.009G241800 5.0kb upstream 5.0kb upstream 12464 true Chr09: 36299429-36311892 Phaseolus vulgaris
Phvul.009G241800 5.0kb upstream 5.0kb upstream 5000 false Chr09: 36299429-36304428 Phaseolus vulgaris
Phvul.009G241800 5.0kb downstream 5.0kb downstream 12464 true Chr09: 36304429-36316892 Phaseolus vulgaris
Phvul.009G241800 5.0kb downstream 5.0kb downstream 5000 false Chr09: 36311893-36316892 Phaseolus vulgaris
Phvul.009G241800 10.0kb upstream 10.0kb upstream 17464 true Chr09: 36294429-36311892 Phaseolus vulgaris
Phvul.009G241800 10.0kb upstream 10.0kb upstream 10000 false Chr09: 36294429-36304428 Phaseolus vulgaris
Phvul.009G241800 10.0kb downstream 10.0kb downstream 17464 true Chr09: 36304429-36321892 Phaseolus vulgaris
Phvul.009G241800 10.0kb downstream 10.0kb downstream 10000 false Chr09: 36311893-36321892 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311207 5265 Fabidae View MSA
124069200 5270 Rosid View MSA
123737302 5271 Pentapetalae View MSA
122788336 5272 Eudicot View MSA
122045942 5273 Angiosperm View MSA
121346195 5274 Embryophyte View MSA
123426796 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.4659 0.0 32.2228   Low
cufflinks 21.8541 0.0 57.349    
cufflinks 12.1596 0.0 31.4304   Low
cufflinks 13.0275 0.0 33.675    
cufflinks 21.8168 0.0 57.0798    
cufflinks 12.5793 0.0 32.5154   Low
cufflinks 25.1249 0.0 66.4538    
cufflinks 17.9753 0.0 46.8143    
cufflinks 28.4197 0.0 75.6713    
cufflinks 43.1431 0.0 119.727 High High
cufflinks 20.7792 0.0 54.282    

0 Strain