Gene : Phvul.009G245800 P. vulgaris v2.1
Defline:  (1 of 3) PTHR22880:SF163 - TRANSCRIPTION FACTOR GTE1 Genomic Order:  2516
Name:  ? Phvul.009G245800 Secondary Identifier:  ? PAC:37150101
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G245800 0.5kb upstream 0.5kb upstream 7090 true Chr09: 36693749-36700838 Phaseolus vulgaris
Phvul.009G245800 0.5kb upstream 0.5kb upstream 500 false Chr09: 36693749-36694248 Phaseolus vulgaris
Phvul.009G245800 0.5kb downstream 0.5kb downstream 7090 true Chr09: 36694249-36701338 Phaseolus vulgaris
Phvul.009G245800 0.5kb downstream 0.5kb downstream 500 false Chr09: 36700839-36701338 Phaseolus vulgaris
Phvul.009G245800 1.0kb upstream 1.0kb upstream 7590 true Chr09: 36693249-36700838 Phaseolus vulgaris
Phvul.009G245800 1.0kb upstream 1.0kb upstream 1000 false Chr09: 36693249-36694248 Phaseolus vulgaris
Phvul.009G245800 1.0kb downstream 1.0kb downstream 7590 true Chr09: 36694249-36701838 Phaseolus vulgaris
Phvul.009G245800 1.0kb downstream 1.0kb downstream 1000 false Chr09: 36700839-36701838 Phaseolus vulgaris
Phvul.009G245800 2.0kb upstream 2.0kb upstream 8590 true Chr09: 36692249-36700838 Phaseolus vulgaris
Phvul.009G245800 2.0kb upstream 2.0kb upstream 2000 false Chr09: 36692249-36694248 Phaseolus vulgaris
Phvul.009G245800 2.0kb downstream 2.0kb downstream 8590 true Chr09: 36694249-36702838 Phaseolus vulgaris
Phvul.009G245800 2.0kb downstream 2.0kb downstream 2000 false Chr09: 36700839-36702838 Phaseolus vulgaris
Phvul.009G245800 5.0kb upstream 5.0kb upstream 11590 true Chr09: 36689249-36700838 Phaseolus vulgaris
Phvul.009G245800 5.0kb upstream 5.0kb upstream 5000 false Chr09: 36689249-36694248 Phaseolus vulgaris
Phvul.009G245800 5.0kb downstream 5.0kb downstream 11590 true Chr09: 36694249-36705838 Phaseolus vulgaris
Phvul.009G245800 5.0kb downstream 5.0kb downstream 5000 false Chr09: 36700839-36705838 Phaseolus vulgaris
Phvul.009G245800 10.0kb upstream 10.0kb upstream 16590 true Chr09: 36684249-36700838 Phaseolus vulgaris
Phvul.009G245800 10.0kb upstream 10.0kb upstream 10000 false Chr09: 36684249-36694248 Phaseolus vulgaris
Phvul.009G245800 10.0kb downstream 10.0kb downstream 16590 true Chr09: 36694249-36710838 Phaseolus vulgaris
Phvul.009G245800 10.0kb downstream 10.0kb downstream 10000 false Chr09: 36700839-36710838 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315825 5265 Fabidae View MSA
124051431 5270 Rosid View MSA
123745671 5271 Pentapetalae View MSA
122792234 5272 Eudicot View MSA
122042971 5273 Angiosperm View MSA
123429103 5275 Viridiplantae View MSA
121343970 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.175712 0.0 0.719651 Low  
cufflinks 0.117546 0.0 0.498354 Low  
cufflinks 1.3132 0.0 4.51207   High
cufflinks 1.32779 0.0 4.62369   High
cufflinks 0.0467444 0.0 0.219491 Low Low
cufflinks 0.483517 0.0 1.82843 Low  
cufflinks 0.425318 0.0 1.62697 Low  
cufflinks 1.60614 0.0 5.38371   High
cufflinks 0.458643 0.0 1.74389 Low  
cufflinks 0.750505 0.0 2.74155    
cufflinks 0.0539927 0.0 0.248754 Low Low

0 Strain