Gene : Phvul.009G230600 P. vulgaris v2.1
Defline:  (1 of 1) PTHR24031//PTHR24031:SF308 - RNA HELICASE // SUBFAMILY NOT NAMED Genomic Order:  2355
Name:  ? Phvul.009G230600 Secondary Identifier:  ? PAC:37149382
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G230600 0.5kb upstream 0.5kb upstream 4266 true Chr09: 34650007-34654272 Phaseolus vulgaris
Phvul.009G230600 0.5kb upstream 0.5kb upstream 500 false Chr09: 34650007-34650506 Phaseolus vulgaris
Phvul.009G230600 0.5kb downstream 0.5kb downstream 4266 true Chr09: 34650507-34654772 Phaseolus vulgaris
Phvul.009G230600 0.5kb downstream 0.5kb downstream 500 false Chr09: 34654273-34654772 Phaseolus vulgaris
Phvul.009G230600 1.0kb upstream 1.0kb upstream 4766 true Chr09: 34649507-34654272 Phaseolus vulgaris
Phvul.009G230600 1.0kb upstream 1.0kb upstream 1000 false Chr09: 34649507-34650506 Phaseolus vulgaris
Phvul.009G230600 1.0kb downstream 1.0kb downstream 4766 true Chr09: 34650507-34655272 Phaseolus vulgaris
Phvul.009G230600 1.0kb downstream 1.0kb downstream 1000 false Chr09: 34654273-34655272 Phaseolus vulgaris
Phvul.009G230600 2.0kb upstream 2.0kb upstream 5766 true Chr09: 34648507-34654272 Phaseolus vulgaris
Phvul.009G230600 2.0kb upstream 2.0kb upstream 2000 false Chr09: 34648507-34650506 Phaseolus vulgaris
Phvul.009G230600 2.0kb downstream 2.0kb downstream 5766 true Chr09: 34650507-34656272 Phaseolus vulgaris
Phvul.009G230600 2.0kb downstream 2.0kb downstream 2000 false Chr09: 34654273-34656272 Phaseolus vulgaris
Phvul.009G230600 5.0kb upstream 5.0kb upstream 8766 true Chr09: 34645507-34654272 Phaseolus vulgaris
Phvul.009G230600 5.0kb upstream 5.0kb upstream 5000 false Chr09: 34645507-34650506 Phaseolus vulgaris
Phvul.009G230600 5.0kb downstream 5.0kb downstream 8766 true Chr09: 34650507-34659272 Phaseolus vulgaris
Phvul.009G230600 5.0kb downstream 5.0kb downstream 5000 false Chr09: 34654273-34659272 Phaseolus vulgaris
Phvul.009G230600 10.0kb upstream 10.0kb upstream 13766 true Chr09: 34640507-34654272 Phaseolus vulgaris
Phvul.009G230600 10.0kb upstream 10.0kb upstream 10000 false Chr09: 34640507-34650506 Phaseolus vulgaris
Phvul.009G230600 10.0kb downstream 10.0kb downstream 13766 true Chr09: 34650507-34664272 Phaseolus vulgaris
Phvul.009G230600 10.0kb downstream 10.0kb downstream 10000 false Chr09: 34654273-34664272 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315314 5265 Fabidae View MSA
124071119 5270 Rosid View MSA
123753006 5271 Pentapetalae View MSA
122788239 5272 Eudicot View MSA
122046690 5273 Angiosperm View MSA
121345295 5274 Embryophyte View MSA
123427522 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 81.1599 0.0 221.813 High  
cufflinks 120.001 0.0 341.495 High High
cufflinks 55.1746 0.0 146.247 High Low
cufflinks 124.102 0.0 352.63 High High
cufflinks 88.1332 0.0 241.83 High  
cufflinks 68.463 0.0 184.079 High  
cufflinks 66.9355 0.0 179.451 High  
cufflinks 79.5602 0.0 216.87 High  
cufflinks 94.1109 0.0 259.77 High  
cufflinks 81.4128 0.0 222.044 High  
cufflinks 99.0981 0.0 274.936 High  

0 Strain