Gene : Phvul.009G232200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR22850//PTHR22850:SF105 - WD40 REPEAT FAMILY // SUBFAMILY NOT NAMED Genomic Order:  2371
Name:  ? Phvul.009G232200 Secondary Identifier:  ? PAC:37152091
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G232200 0.5kb upstream 0.5kb upstream 6952 true Chr09: 34878839-34885790 Phaseolus vulgaris
Phvul.009G232200 0.5kb upstream 0.5kb upstream 500 false Chr09: 34878839-34879338 Phaseolus vulgaris
Phvul.009G232200 0.5kb downstream 0.5kb downstream 6952 true Chr09: 34879339-34886290 Phaseolus vulgaris
Phvul.009G232200 0.5kb downstream 0.5kb downstream 500 false Chr09: 34885791-34886290 Phaseolus vulgaris
Phvul.009G232200 1.0kb upstream 1.0kb upstream 7452 true Chr09: 34878339-34885790 Phaseolus vulgaris
Phvul.009G232200 1.0kb upstream 1.0kb upstream 1000 false Chr09: 34878339-34879338 Phaseolus vulgaris
Phvul.009G232200 1.0kb downstream 1.0kb downstream 7452 true Chr09: 34879339-34886790 Phaseolus vulgaris
Phvul.009G232200 1.0kb downstream 1.0kb downstream 1000 false Chr09: 34885791-34886790 Phaseolus vulgaris
Phvul.009G232200 2.0kb upstream 2.0kb upstream 8452 true Chr09: 34877339-34885790 Phaseolus vulgaris
Phvul.009G232200 2.0kb upstream 2.0kb upstream 2000 false Chr09: 34877339-34879338 Phaseolus vulgaris
Phvul.009G232200 2.0kb downstream 2.0kb downstream 8452 true Chr09: 34879339-34887790 Phaseolus vulgaris
Phvul.009G232200 2.0kb downstream 2.0kb downstream 2000 false Chr09: 34885791-34887790 Phaseolus vulgaris
Phvul.009G232200 5.0kb upstream 5.0kb upstream 11452 true Chr09: 34874339-34885790 Phaseolus vulgaris
Phvul.009G232200 5.0kb upstream 5.0kb upstream 5000 false Chr09: 34874339-34879338 Phaseolus vulgaris
Phvul.009G232200 5.0kb downstream 5.0kb downstream 11452 true Chr09: 34879339-34890790 Phaseolus vulgaris
Phvul.009G232200 5.0kb downstream 5.0kb downstream 5000 false Chr09: 34885791-34890790 Phaseolus vulgaris
Phvul.009G232200 10.0kb upstream 10.0kb upstream 16452 true Chr09: 34869339-34885790 Phaseolus vulgaris
Phvul.009G232200 10.0kb upstream 10.0kb upstream 10000 false Chr09: 34869339-34879338 Phaseolus vulgaris
Phvul.009G232200 10.0kb downstream 10.0kb downstream 16452 true Chr09: 34879339-34895790 Phaseolus vulgaris
Phvul.009G232200 10.0kb downstream 10.0kb downstream 10000 false Chr09: 34885791-34895790 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041058 5273 Angiosperm View MSA
122303424 5265 Fabidae View MSA
124070712 5270 Rosid View MSA
123743573 5271 Pentapetalae View MSA
122790330 5272 Eudicot View MSA
121347488 5274 Embryophyte View MSA
123428491 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 47.5328 0.0 126.82 High  
cufflinks 56.2877 0.0 152.649 High High
cufflinks 37.6937 0.0 99.1079    
cufflinks 32.1235 0.0 83.5648   Low
cufflinks 39.4734 0.0 103.764 High  
cufflinks 43.2614 0.0 114.83 High  
cufflinks 41.8322 0.0 110.918 High  
cufflinks 46.809 0.0 125.471 High  
cufflinks 42.9222 0.0 113.946 High  
cufflinks 39.8236 0.0 104.968 High  
cufflinks 48.6645 0.0 129.999 High  

0 Strain