Gene : Phvul.009G233100 P. vulgaris v2.1
Defline:  (1 of 2) PTHR33977:SF1 - ZINC ION BINDING PROTEIN Genomic Order:  2380
Name:  ? Phvul.009G233100 Secondary Identifier:  ? PAC:37149729
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G233100 0.5kb upstream 0.5kb upstream 7729 true Chr09: 34986426-34994154 Phaseolus vulgaris
Phvul.009G233100 0.5kb upstream 0.5kb upstream 500 false Chr09: 34986426-34986925 Phaseolus vulgaris
Phvul.009G233100 0.5kb downstream 0.5kb downstream 7729 true Chr09: 34986926-34994654 Phaseolus vulgaris
Phvul.009G233100 0.5kb downstream 0.5kb downstream 500 false Chr09: 34994155-34994654 Phaseolus vulgaris
Phvul.009G233100 1.0kb upstream 1.0kb upstream 8229 true Chr09: 34985926-34994154 Phaseolus vulgaris
Phvul.009G233100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 34985926-34986925 Phaseolus vulgaris
Phvul.009G233100 1.0kb downstream 1.0kb downstream 8229 true Chr09: 34986926-34995154 Phaseolus vulgaris
Phvul.009G233100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 34994155-34995154 Phaseolus vulgaris
Phvul.009G233100 2.0kb upstream 2.0kb upstream 9229 true Chr09: 34984926-34994154 Phaseolus vulgaris
Phvul.009G233100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 34984926-34986925 Phaseolus vulgaris
Phvul.009G233100 2.0kb downstream 2.0kb downstream 9229 true Chr09: 34986926-34996154 Phaseolus vulgaris
Phvul.009G233100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 34994155-34996154 Phaseolus vulgaris
Phvul.009G233100 5.0kb upstream 5.0kb upstream 12229 true Chr09: 34981926-34994154 Phaseolus vulgaris
Phvul.009G233100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 34981926-34986925 Phaseolus vulgaris
Phvul.009G233100 5.0kb downstream 5.0kb downstream 12229 true Chr09: 34986926-34999154 Phaseolus vulgaris
Phvul.009G233100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 34994155-34999154 Phaseolus vulgaris
Phvul.009G233100 10.0kb upstream 10.0kb upstream 17229 true Chr09: 34976926-34994154 Phaseolus vulgaris
Phvul.009G233100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 34976926-34986925 Phaseolus vulgaris
Phvul.009G233100 10.0kb downstream 10.0kb downstream 17229 true Chr09: 34986926-35004154 Phaseolus vulgaris
Phvul.009G233100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 34994155-35004154 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305839 5265 Fabidae View MSA
124067545 5270 Rosid View MSA
123749015 5271 Pentapetalae View MSA
122795636 5272 Eudicot View MSA
122049514 5273 Angiosperm View MSA
121311449 5274 Embryophyte View MSA
123348744 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.62223 0.0 25.466    
cufflinks 7.62176 0.0 25.557    
cufflinks 8.3385 0.0 27.4151    
cufflinks 5.22275 0.0 21.5069   Low
cufflinks 7.96379 0.0 23.8841    
cufflinks 6.97176 0.0 26.3484    
cufflinks 9.08838 0.0 29.7422    
cufflinks 7.64132 0.0 30.5642    
cufflinks 8.52515 0.0 28.2382    
cufflinks 11.6659 0.0 41.4785   High
cufflinks 7.56669 0.0 22.3489    

0 Strain