Gene : Phvul.008G122100 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31140:SF1 - B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 Genomic Order:  1242
Name:  ? Phvul.008G122100 Secondary Identifier:  ? PAC:37159057
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G122100 0.5kb upstream 0.5kb upstream 3599 true Chr08: 17414107-17417705 Phaseolus vulgaris
Phvul.008G122100 0.5kb upstream 0.5kb upstream 500 false Chr08: 17417206-17417705 Phaseolus vulgaris
Phvul.008G122100 0.5kb downstream 0.5kb downstream 3599 true Chr08: 17413607-17417205 Phaseolus vulgaris
Phvul.008G122100 0.5kb downstream 0.5kb downstream 500 false Chr08: 17413607-17414106 Phaseolus vulgaris
Phvul.008G122100 1.0kb upstream 1.0kb upstream 4099 true Chr08: 17414107-17418205 Phaseolus vulgaris
Phvul.008G122100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 17417206-17418205 Phaseolus vulgaris
Phvul.008G122100 1.0kb downstream 1.0kb downstream 4099 true Chr08: 17413107-17417205 Phaseolus vulgaris
Phvul.008G122100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 17413107-17414106 Phaseolus vulgaris
Phvul.008G122100 2.0kb upstream 2.0kb upstream 5099 true Chr08: 17414107-17419205 Phaseolus vulgaris
Phvul.008G122100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 17417206-17419205 Phaseolus vulgaris
Phvul.008G122100 2.0kb downstream 2.0kb downstream 5099 true Chr08: 17412107-17417205 Phaseolus vulgaris
Phvul.008G122100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 17412107-17414106 Phaseolus vulgaris
Phvul.008G122100 5.0kb upstream 5.0kb upstream 8099 true Chr08: 17414107-17422205 Phaseolus vulgaris
Phvul.008G122100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 17417206-17422205 Phaseolus vulgaris
Phvul.008G122100 5.0kb downstream 5.0kb downstream 8099 true Chr08: 17409107-17417205 Phaseolus vulgaris
Phvul.008G122100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 17409107-17414106 Phaseolus vulgaris
Phvul.008G122100 10.0kb upstream 10.0kb upstream 13099 true Chr08: 17414107-17427205 Phaseolus vulgaris
Phvul.008G122100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 17417206-17427205 Phaseolus vulgaris
Phvul.008G122100 10.0kb downstream 10.0kb downstream 13099 true Chr08: 17404107-17417205 Phaseolus vulgaris
Phvul.008G122100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 17404107-17414106 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304083 5265 Fabidae View MSA
124067839 5270 Rosid View MSA
123747298 5271 Pentapetalae View MSA
122786599 5272 Eudicot View MSA
122044257 5273 Angiosperm View MSA
121351416 5274 Embryophyte View MSA
123428387 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0215248 0.0 0.0990763 Low  
cufflinks 0.189752 0.0 0.722427 Low High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0183295 0.0 0.0860672 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.00840305 0.0 0.0425467 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.00565756 0.0 0.0302617 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain