Gene : Phvul.008G124000 P. vulgaris v2.1
Defline:  (1 of 1) PF12452 - Protein of unknown function (DUF3685) (DUF3685) Genomic Order:  1220
Name:  ? Phvul.008G124000 Secondary Identifier:  ? PAC:37158035
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G124000 0.5kb upstream 0.5kb upstream 9069 true Chr08: 16845580-16854648 Phaseolus vulgaris
Phvul.008G124000 0.5kb upstream 0.5kb upstream 500 false Chr08: 16854149-16854648 Phaseolus vulgaris
Phvul.008G124000 0.5kb downstream 0.5kb downstream 9069 true Chr08: 16845080-16854148 Phaseolus vulgaris
Phvul.008G124000 0.5kb downstream 0.5kb downstream 500 false Chr08: 16845080-16845579 Phaseolus vulgaris
Phvul.008G124000 1.0kb upstream 1.0kb upstream 9569 true Chr08: 16845580-16855148 Phaseolus vulgaris
Phvul.008G124000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 16854149-16855148 Phaseolus vulgaris
Phvul.008G124000 1.0kb downstream 1.0kb downstream 9569 true Chr08: 16844580-16854148 Phaseolus vulgaris
Phvul.008G124000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 16844580-16845579 Phaseolus vulgaris
Phvul.008G124000 2.0kb upstream 2.0kb upstream 10569 true Chr08: 16845580-16856148 Phaseolus vulgaris
Phvul.008G124000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 16854149-16856148 Phaseolus vulgaris
Phvul.008G124000 2.0kb downstream 2.0kb downstream 10569 true Chr08: 16843580-16854148 Phaseolus vulgaris
Phvul.008G124000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 16843580-16845579 Phaseolus vulgaris
Phvul.008G124000 5.0kb upstream 5.0kb upstream 13569 true Chr08: 16845580-16859148 Phaseolus vulgaris
Phvul.008G124000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 16854149-16859148 Phaseolus vulgaris
Phvul.008G124000 5.0kb downstream 5.0kb downstream 13569 true Chr08: 16840580-16854148 Phaseolus vulgaris
Phvul.008G124000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 16840580-16845579 Phaseolus vulgaris
Phvul.008G124000 10.0kb upstream 10.0kb upstream 18569 true Chr08: 16845580-16864148 Phaseolus vulgaris
Phvul.008G124000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 16854149-16864148 Phaseolus vulgaris
Phvul.008G124000 10.0kb downstream 10.0kb downstream 18569 true Chr08: 16835580-16854148 Phaseolus vulgaris
Phvul.008G124000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 16835580-16845579 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308912 5265 Fabidae View MSA
124065521 5270 Rosid View MSA
123739114 5271 Pentapetalae View MSA
122786546 5272 Eudicot View MSA
122046788 5273 Angiosperm View MSA
121346077 5274 Embryophyte View MSA
123380322 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.70201 0.0 7.62393    
cufflinks 2.82131 0.0 11.4154    
cufflinks 21.2449 0.0 61.2629   High
cufflinks 2.99607 0.0 11.9614    
cufflinks 3.25466 0.0 12.591    
cufflinks 12.7616 0.0 42.1342   High
cufflinks 2.89363 0.0 12.1042    
cufflinks 3.69245 0.0 13.4733    
cufflinks 2.12102 0.0 9.70932    
cufflinks 1.82219 0.0 8.02457    
cufflinks 2.33782 0.0 7.96496    

0 Strain