Gene : Phvul.008G107200 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11654//PTHR11654:SF125 - OLIGOPEPTIDE TRANSPORTER-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1050
Name:  ? Phvul.008G107200 Secondary Identifier:  ? PAC:37157622
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G107200 0.5kb upstream 0.5kb upstream 4917 true Chr08: 11921086-11926002 Phaseolus vulgaris
Phvul.008G107200 0.5kb upstream 0.5kb upstream 500 false Chr08: 11921086-11921585 Phaseolus vulgaris
Phvul.008G107200 0.5kb downstream 0.5kb downstream 4917 true Chr08: 11921586-11926502 Phaseolus vulgaris
Phvul.008G107200 0.5kb downstream 0.5kb downstream 500 false Chr08: 11926003-11926502 Phaseolus vulgaris
Phvul.008G107200 1.0kb upstream 1.0kb upstream 5417 true Chr08: 11920586-11926002 Phaseolus vulgaris
Phvul.008G107200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 11920586-11921585 Phaseolus vulgaris
Phvul.008G107200 1.0kb downstream 1.0kb downstream 5417 true Chr08: 11921586-11927002 Phaseolus vulgaris
Phvul.008G107200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 11926003-11927002 Phaseolus vulgaris
Phvul.008G107200 2.0kb upstream 2.0kb upstream 6417 true Chr08: 11919586-11926002 Phaseolus vulgaris
Phvul.008G107200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 11919586-11921585 Phaseolus vulgaris
Phvul.008G107200 2.0kb downstream 2.0kb downstream 6417 true Chr08: 11921586-11928002 Phaseolus vulgaris
Phvul.008G107200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 11926003-11928002 Phaseolus vulgaris
Phvul.008G107200 5.0kb upstream 5.0kb upstream 9417 true Chr08: 11916586-11926002 Phaseolus vulgaris
Phvul.008G107200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 11916586-11921585 Phaseolus vulgaris
Phvul.008G107200 5.0kb downstream 5.0kb downstream 9417 true Chr08: 11921586-11931002 Phaseolus vulgaris
Phvul.008G107200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 11926003-11931002 Phaseolus vulgaris
Phvul.008G107200 10.0kb upstream 10.0kb upstream 14417 true Chr08: 11911586-11926002 Phaseolus vulgaris
Phvul.008G107200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 11911586-11921585 Phaseolus vulgaris
Phvul.008G107200 10.0kb downstream 10.0kb downstream 14417 true Chr08: 11921586-11936002 Phaseolus vulgaris
Phvul.008G107200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 11926003-11936002 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314074 5265 Fabidae View MSA
124065888 5270 Rosid View MSA
123751146 5271 Pentapetalae View MSA
122796632 5272 Eudicot View MSA
122045333 5273 Angiosperm View MSA
121350655 5274 Embryophyte View MSA
123428779 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 38.589 0.0 149.54 High High
cufflinks 16.1577 0.0 56.1761    
cufflinks 11.5169 0.0 43.722    
cufflinks 6.99708 0.0 26.8759   Low
cufflinks 17.576 0.0 60.953    
cufflinks 9.12334 0.0 37.2436    
cufflinks 11.8676 0.0 44.6941    
cufflinks 4.03107 0.0 17.7327   Low
cufflinks 10.5027 0.0 40.59    
cufflinks 20.5926 0.0 72.4875    
cufflinks 19.5717 0.0 67.6067    

0 Strain