Gene : Phvul.008G111300 P. vulgaris v2.1
Defline:  (1 of 16) PTHR33103:SF4 - EMB Genomic Order:  1090
Name:  ? Phvul.008G111300 Secondary Identifier:  ? PAC:37158934
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G111300 0.5kb upstream 0.5kb upstream 3945 true Chr08: 12639828-12643772 Phaseolus vulgaris
Phvul.008G111300 0.5kb upstream 0.5kb upstream 500 false Chr08: 12639828-12640327 Phaseolus vulgaris
Phvul.008G111300 0.5kb downstream 0.5kb downstream 3945 true Chr08: 12640328-12644272 Phaseolus vulgaris
Phvul.008G111300 0.5kb downstream 0.5kb downstream 500 false Chr08: 12643773-12644272 Phaseolus vulgaris
Phvul.008G111300 1.0kb upstream 1.0kb upstream 4445 true Chr08: 12639328-12643772 Phaseolus vulgaris
Phvul.008G111300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 12639328-12640327 Phaseolus vulgaris
Phvul.008G111300 1.0kb downstream 1.0kb downstream 4445 true Chr08: 12640328-12644772 Phaseolus vulgaris
Phvul.008G111300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 12643773-12644772 Phaseolus vulgaris
Phvul.008G111300 2.0kb upstream 2.0kb upstream 5445 true Chr08: 12638328-12643772 Phaseolus vulgaris
Phvul.008G111300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 12638328-12640327 Phaseolus vulgaris
Phvul.008G111300 2.0kb downstream 2.0kb downstream 5445 true Chr08: 12640328-12645772 Phaseolus vulgaris
Phvul.008G111300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 12643773-12645772 Phaseolus vulgaris
Phvul.008G111300 5.0kb upstream 5.0kb upstream 8445 true Chr08: 12635328-12643772 Phaseolus vulgaris
Phvul.008G111300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 12635328-12640327 Phaseolus vulgaris
Phvul.008G111300 5.0kb downstream 5.0kb downstream 8445 true Chr08: 12640328-12648772 Phaseolus vulgaris
Phvul.008G111300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 12643773-12648772 Phaseolus vulgaris
Phvul.008G111300 10.0kb upstream 10.0kb upstream 13445 true Chr08: 12630328-12643772 Phaseolus vulgaris
Phvul.008G111300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 12630328-12640327 Phaseolus vulgaris
Phvul.008G111300 10.0kb downstream 10.0kb downstream 13445 true Chr08: 12640328-12653772 Phaseolus vulgaris
Phvul.008G111300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 12643773-12653772 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029295 5273 Angiosperm View MSA
122255035 5265 Fabidae View MSA
124073247 5270 Rosid View MSA
123752528 5271 Pentapetalae View MSA
122797868 5272 Eudicot View MSA
121350471 5274 Embryophyte View MSA
123381749 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.284829 0.0 1.11116 Low  
cufflinks 0.449736 0.0 1.69206 Low  
cufflinks 1.75328 0.0 5.73171    
cufflinks 0.592336 0.0 2.18756    
cufflinks 1.82582 0.0 6.03323    
cufflinks 0.865901 0.0 3.0711    
cufflinks 1.01512 0.0 3.55046    
cufflinks 0.266421 0.0 1.04314 Low  
cufflinks 1.8263 0.0 5.98404    
cufflinks 0.0349057 0.0 0.164911 Low Low
cufflinks 1.10316 0.0 3.84159    

0 Strain