Gene : Phvul.008G220400 P. vulgaris v2.1
Defline:  (1 of 4) PTHR31241:SF2 - DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2A-RELATED Genomic Order:  2243
Name:  ? Phvul.008G220400 Secondary Identifier:  ? PAC:37158652
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G220400 0.5kb upstream 0.5kb upstream 2658 true Chr08: 56938161-56940818 Phaseolus vulgaris
Phvul.008G220400 0.5kb upstream 0.5kb upstream 500 false Chr08: 56938161-56938660 Phaseolus vulgaris
Phvul.008G220400 0.5kb downstream 0.5kb downstream 2658 true Chr08: 56938661-56941318 Phaseolus vulgaris
Phvul.008G220400 0.5kb downstream 0.5kb downstream 500 false Chr08: 56940819-56941318 Phaseolus vulgaris
Phvul.008G220400 1.0kb upstream 1.0kb upstream 3158 true Chr08: 56937661-56940818 Phaseolus vulgaris
Phvul.008G220400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 56937661-56938660 Phaseolus vulgaris
Phvul.008G220400 1.0kb downstream 1.0kb downstream 3158 true Chr08: 56938661-56941818 Phaseolus vulgaris
Phvul.008G220400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 56940819-56941818 Phaseolus vulgaris
Phvul.008G220400 2.0kb upstream 2.0kb upstream 4158 true Chr08: 56936661-56940818 Phaseolus vulgaris
Phvul.008G220400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 56936661-56938660 Phaseolus vulgaris
Phvul.008G220400 2.0kb downstream 2.0kb downstream 4158 true Chr08: 56938661-56942818 Phaseolus vulgaris
Phvul.008G220400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 56940819-56942818 Phaseolus vulgaris
Phvul.008G220400 5.0kb upstream 5.0kb upstream 7158 true Chr08: 56933661-56940818 Phaseolus vulgaris
Phvul.008G220400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 56933661-56938660 Phaseolus vulgaris
Phvul.008G220400 5.0kb downstream 5.0kb downstream 7158 true Chr08: 56938661-56945818 Phaseolus vulgaris
Phvul.008G220400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 56940819-56945818 Phaseolus vulgaris
Phvul.008G220400 10.0kb upstream 10.0kb upstream 12158 true Chr08: 56928661-56940818 Phaseolus vulgaris
Phvul.008G220400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 56928661-56938660 Phaseolus vulgaris
Phvul.008G220400 10.0kb downstream 10.0kb downstream 12158 true Chr08: 56938661-56950818 Phaseolus vulgaris
Phvul.008G220400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 56940819-56950818 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305281 5265 Fabidae View MSA
124068554 5270 Rosid View MSA
123752289 5271 Pentapetalae View MSA
122797550 5272 Eudicot View MSA
122049756 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121349420 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.73113 0.0 10.9996   High
cufflinks 1.09934 0.0 3.73346    
cufflinks 1.68587 0.0 5.43791    
cufflinks 1.67271 0.0 5.47557    
cufflinks 1.80317 0.0 5.83779    
cufflinks 1.52517 0.0 4.98429    
cufflinks 1.43446 0.0 4.71015    
cufflinks 3.15392 0.0 9.44141    
cufflinks 0.68652 0.0 2.45114   Low
cufflinks 6.14111 0.0 17.2767   High
cufflinks 1.90409 0.0 6.10331    

0 Strain