Gene : Phvul.008G081200 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31451:SF17 - MANNAN ENDO-1,4-BETA-MANNOSIDASE 6 Genomic Order:  839
Name:  ? Phvul.008G081200 Secondary Identifier:  ? PAC:37158883
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G081200 0.5kb upstream 0.5kb upstream 3275 true Chr08: 7888994-7892268 Phaseolus vulgaris
Phvul.008G081200 0.5kb upstream 0.5kb upstream 500 false Chr08: 7888994-7889493 Phaseolus vulgaris
Phvul.008G081200 0.5kb downstream 0.5kb downstream 3275 true Chr08: 7889494-7892768 Phaseolus vulgaris
Phvul.008G081200 0.5kb downstream 0.5kb downstream 500 false Chr08: 7892269-7892768 Phaseolus vulgaris
Phvul.008G081200 1.0kb upstream 1.0kb upstream 3775 true Chr08: 7888494-7892268 Phaseolus vulgaris
Phvul.008G081200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 7888494-7889493 Phaseolus vulgaris
Phvul.008G081200 1.0kb downstream 1.0kb downstream 3775 true Chr08: 7889494-7893268 Phaseolus vulgaris
Phvul.008G081200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 7892269-7893268 Phaseolus vulgaris
Phvul.008G081200 2.0kb upstream 2.0kb upstream 4775 true Chr08: 7887494-7892268 Phaseolus vulgaris
Phvul.008G081200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 7887494-7889493 Phaseolus vulgaris
Phvul.008G081200 2.0kb downstream 2.0kb downstream 4775 true Chr08: 7889494-7894268 Phaseolus vulgaris
Phvul.008G081200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 7892269-7894268 Phaseolus vulgaris
Phvul.008G081200 5.0kb upstream 5.0kb upstream 7775 true Chr08: 7884494-7892268 Phaseolus vulgaris
Phvul.008G081200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 7884494-7889493 Phaseolus vulgaris
Phvul.008G081200 5.0kb downstream 5.0kb downstream 7775 true Chr08: 7889494-7897268 Phaseolus vulgaris
Phvul.008G081200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 7892269-7897268 Phaseolus vulgaris
Phvul.008G081200 10.0kb upstream 10.0kb upstream 12775 true Chr08: 7879494-7892268 Phaseolus vulgaris
Phvul.008G081200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 7879494-7889493 Phaseolus vulgaris
Phvul.008G081200 10.0kb downstream 10.0kb downstream 12775 true Chr08: 7889494-7902268 Phaseolus vulgaris
Phvul.008G081200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 7892269-7902268 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310031 5265 Fabidae View MSA
124070287 5270 Rosid View MSA
123736857 5271 Pentapetalae View MSA
122790316 5272 Eudicot View MSA
122051044 5273 Angiosperm View MSA
121348976 5274 Embryophyte View MSA
123428551 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.81636 0.0 11.4564    
cufflinks 4.37088 0.0 12.8976    
cufflinks 19.2811 0.0 50.194    
cufflinks 16.0732 0.0 42.5108    
cufflinks 17.8363 0.0 46.8647    
cufflinks 11.151 0.0 30.0651    
cufflinks 7.36572 0.0 20.5755    
cufflinks 1.80913 0.0 5.86742    
cufflinks 14.3036 0.0 37.8898    
cufflinks 0.226877 0.0 0.900741 Low Low
cufflinks 24.0893 0.0 62.4637    

0 Strain