Gene : Phvul.008G087300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR32444:SF6 - D-MANNOSE BINDING LECTIN PROTEIN WITH APPLE-LIKE CARBOHYDRATE-BINDING DOMAIN Genomic Order:  886
Name:  ? Phvul.008G087300 Secondary Identifier:  ? PAC:37158702
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G087300 0.5kb upstream 0.5kb upstream 3028 true Chr08: 8574740-8577767 Phaseolus vulgaris
Phvul.008G087300 0.5kb upstream 0.5kb upstream 500 false Chr08: 8577268-8577767 Phaseolus vulgaris
Phvul.008G087300 0.5kb downstream 0.5kb downstream 3028 true Chr08: 8574240-8577267 Phaseolus vulgaris
Phvul.008G087300 0.5kb downstream 0.5kb downstream 500 false Chr08: 8574240-8574739 Phaseolus vulgaris
Phvul.008G087300 1.0kb upstream 1.0kb upstream 3528 true Chr08: 8574740-8578267 Phaseolus vulgaris
Phvul.008G087300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 8577268-8578267 Phaseolus vulgaris
Phvul.008G087300 1.0kb downstream 1.0kb downstream 3528 true Chr08: 8573740-8577267 Phaseolus vulgaris
Phvul.008G087300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 8573740-8574739 Phaseolus vulgaris
Phvul.008G087300 2.0kb upstream 2.0kb upstream 4528 true Chr08: 8574740-8579267 Phaseolus vulgaris
Phvul.008G087300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 8577268-8579267 Phaseolus vulgaris
Phvul.008G087300 2.0kb downstream 2.0kb downstream 4528 true Chr08: 8572740-8577267 Phaseolus vulgaris
Phvul.008G087300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 8572740-8574739 Phaseolus vulgaris
Phvul.008G087300 5.0kb upstream 5.0kb upstream 7528 true Chr08: 8574740-8582267 Phaseolus vulgaris
Phvul.008G087300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 8577268-8582267 Phaseolus vulgaris
Phvul.008G087300 5.0kb downstream 5.0kb downstream 7528 true Chr08: 8569740-8577267 Phaseolus vulgaris
Phvul.008G087300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 8569740-8574739 Phaseolus vulgaris
Phvul.008G087300 10.0kb upstream 10.0kb upstream 12528 true Chr08: 8574740-8587267 Phaseolus vulgaris
Phvul.008G087300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 8577268-8587267 Phaseolus vulgaris
Phvul.008G087300 10.0kb downstream 10.0kb downstream 12528 true Chr08: 8564740-8577267 Phaseolus vulgaris
Phvul.008G087300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 8564740-8574739 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029223 5273 Angiosperm View MSA
122307403 5265 Fabidae View MSA
124061052 5270 Rosid View MSA
123746754 5271 Pentapetalae View MSA
122790978 5272 Eudicot View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.441578 0.0 1.6234    
cufflinks 0.246602 0.0 0.951714 Low  
cufflinks 0.194436 0.0 0.762523 Low Low
cufflinks 0.713641 0.0 2.54017    
cufflinks 0.473751 0.0 1.74515 Low  
cufflinks 1.15964 0.0 3.86309   High
cufflinks 0.842967 0.0 2.9121    
cufflinks 0.525151 0.0 1.89157    
cufflinks 0.595315 0.0 2.13895    
cufflinks 0.131484 0.0 0.533958 Low Low
cufflinks 0.972965 0.0 3.33154   High

0 Strain