Gene : Phvul.008G072700 P. vulgaris v2.1
Defline:  (1 of 1) KOG0843 - Transcription factor EMX1 and related HOX domain proteins Genomic Order:  751
Name:  ? Phvul.008G072700 Secondary Identifier:  ? PAC:37161126
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G072700 0.5kb upstream 0.5kb upstream 6881 true Chr08: 6803799-6810679 Phaseolus vulgaris
Phvul.008G072700 0.5kb upstream 0.5kb upstream 500 false Chr08: 6803799-6804298 Phaseolus vulgaris
Phvul.008G072700 0.5kb downstream 0.5kb downstream 6881 true Chr08: 6804299-6811179 Phaseolus vulgaris
Phvul.008G072700 0.5kb downstream 0.5kb downstream 500 false Chr08: 6810680-6811179 Phaseolus vulgaris
Phvul.008G072700 1.0kb upstream 1.0kb upstream 7381 true Chr08: 6803299-6810679 Phaseolus vulgaris
Phvul.008G072700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 6803299-6804298 Phaseolus vulgaris
Phvul.008G072700 1.0kb downstream 1.0kb downstream 7381 true Chr08: 6804299-6811679 Phaseolus vulgaris
Phvul.008G072700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 6810680-6811679 Phaseolus vulgaris
Phvul.008G072700 2.0kb upstream 2.0kb upstream 8381 true Chr08: 6802299-6810679 Phaseolus vulgaris
Phvul.008G072700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 6802299-6804298 Phaseolus vulgaris
Phvul.008G072700 2.0kb downstream 2.0kb downstream 8381 true Chr08: 6804299-6812679 Phaseolus vulgaris
Phvul.008G072700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 6810680-6812679 Phaseolus vulgaris
Phvul.008G072700 5.0kb upstream 5.0kb upstream 11381 true Chr08: 6799299-6810679 Phaseolus vulgaris
Phvul.008G072700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 6799299-6804298 Phaseolus vulgaris
Phvul.008G072700 5.0kb downstream 5.0kb downstream 11381 true Chr08: 6804299-6815679 Phaseolus vulgaris
Phvul.008G072700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 6810680-6815679 Phaseolus vulgaris
Phvul.008G072700 10.0kb upstream 10.0kb upstream 16381 true Chr08: 6794299-6810679 Phaseolus vulgaris
Phvul.008G072700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 6794299-6804298 Phaseolus vulgaris
Phvul.008G072700 10.0kb downstream 10.0kb downstream 16381 true Chr08: 6804299-6820679 Phaseolus vulgaris
Phvul.008G072700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 6810680-6820679 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312921 5265 Fabidae View MSA
124063291 5270 Rosid View MSA
123740352 5271 Pentapetalae View MSA
122790073 5272 Eudicot View MSA
122048483 5273 Angiosperm View MSA
121350910 5274 Embryophyte View MSA
123381934 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.309 0.0 29.2538    
cufflinks 8.31895 0.0 21.5276    
cufflinks 14.323 0.0 37.2197    
cufflinks 11.3867 0.0 29.4541    
cufflinks 9.49947 0.0 24.5572    
cufflinks 29.1131 0.0 79.5302   High
cufflinks 0.339043 0.0 1.17125 Low Low
cufflinks 0.410635 0.0 1.39719 Low Low
cufflinks 1.01207 0.0 3.09219   Low
cufflinks 7.14881 0.0 18.5681    
cufflinks 12.0296 0.0 31.1601    

0 Strain