Gene : Phvul.008G073800 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11945//PTHR11945:SF222 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  762
Name:  ? Phvul.008G073800 Secondary Identifier:  ? PAC:37157982
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G073800 0.5kb upstream 0.5kb upstream 14928 true Chr08: 6983492-6998419 Phaseolus vulgaris
Phvul.008G073800 0.5kb upstream 0.5kb upstream 500 false Chr08: 6983492-6983991 Phaseolus vulgaris
Phvul.008G073800 0.5kb downstream 0.5kb downstream 14928 true Chr08: 6983992-6998919 Phaseolus vulgaris
Phvul.008G073800 0.5kb downstream 0.5kb downstream 500 false Chr08: 6998420-6998919 Phaseolus vulgaris
Phvul.008G073800 1.0kb upstream 1.0kb upstream 15428 true Chr08: 6982992-6998419 Phaseolus vulgaris
Phvul.008G073800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 6982992-6983991 Phaseolus vulgaris
Phvul.008G073800 1.0kb downstream 1.0kb downstream 15428 true Chr08: 6983992-6999419 Phaseolus vulgaris
Phvul.008G073800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 6998420-6999419 Phaseolus vulgaris
Phvul.008G073800 2.0kb upstream 2.0kb upstream 16428 true Chr08: 6981992-6998419 Phaseolus vulgaris
Phvul.008G073800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 6981992-6983991 Phaseolus vulgaris
Phvul.008G073800 2.0kb downstream 2.0kb downstream 16428 true Chr08: 6983992-7000419 Phaseolus vulgaris
Phvul.008G073800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 6998420-7000419 Phaseolus vulgaris
Phvul.008G073800 5.0kb upstream 5.0kb upstream 19428 true Chr08: 6978992-6998419 Phaseolus vulgaris
Phvul.008G073800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 6978992-6983991 Phaseolus vulgaris
Phvul.008G073800 5.0kb downstream 5.0kb downstream 19428 true Chr08: 6983992-7003419 Phaseolus vulgaris
Phvul.008G073800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 6998420-7003419 Phaseolus vulgaris
Phvul.008G073800 10.0kb upstream 10.0kb upstream 24428 true Chr08: 6973992-6998419 Phaseolus vulgaris
Phvul.008G073800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 6973992-6983991 Phaseolus vulgaris
Phvul.008G073800 10.0kb downstream 10.0kb downstream 24428 true Chr08: 6983992-7008419 Phaseolus vulgaris
Phvul.008G073800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 6998420-7008419 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311356 5265 Fabidae View MSA
124073798 5270 Rosid View MSA
123750432 5271 Pentapetalae View MSA
122795311 5272 Eudicot View MSA
122042392 5273 Angiosperm View MSA
121309956 5274 Embryophyte View MSA
123347576 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.60063 0.0 5.49734    
cufflinks 0.469845 0.0 1.80466 Low  
cufflinks 4.75031 0.0 14.3691    
cufflinks 1.76861 0.0 6.04106    
cufflinks 2.74572 0.0 8.94629    
cufflinks 18.7529 0.0 49.8414    
cufflinks 12.7655 0.0 35.0027    
cufflinks 11.8806 0.0 32.7237    
cufflinks 10.263 0.0 28.6963    
cufflinks 0.0155656 0.0 0.0832589 Low Low
cufflinks 15.4125 0.0 41.7581    

0 Strain