Gene : Phvul.008G062000 P. vulgaris v2.1
Defline:  (1 of 3) PTHR11165//PTHR11165:SF61 - SKP1 // SUBFAMILY NOT NAMED Genomic Order:  640
Name:  ? Phvul.008G062000 Secondary Identifier:  ? PAC:37160698
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G062000 0.5kb upstream 0.5kb upstream 8793 true Chr08: 5609966-5618758 Phaseolus vulgaris
Phvul.008G062000 0.5kb upstream 0.5kb upstream 500 false Chr08: 5609966-5610465 Phaseolus vulgaris
Phvul.008G062000 0.5kb downstream 0.5kb downstream 8793 true Chr08: 5610466-5619258 Phaseolus vulgaris
Phvul.008G062000 0.5kb downstream 0.5kb downstream 500 false Chr08: 5618759-5619258 Phaseolus vulgaris
Phvul.008G062000 1.0kb upstream 1.0kb upstream 9293 true Chr08: 5609466-5618758 Phaseolus vulgaris
Phvul.008G062000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 5609466-5610465 Phaseolus vulgaris
Phvul.008G062000 1.0kb downstream 1.0kb downstream 9293 true Chr08: 5610466-5619758 Phaseolus vulgaris
Phvul.008G062000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 5618759-5619758 Phaseolus vulgaris
Phvul.008G062000 2.0kb upstream 2.0kb upstream 10293 true Chr08: 5608466-5618758 Phaseolus vulgaris
Phvul.008G062000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 5608466-5610465 Phaseolus vulgaris
Phvul.008G062000 2.0kb downstream 2.0kb downstream 10293 true Chr08: 5610466-5620758 Phaseolus vulgaris
Phvul.008G062000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 5618759-5620758 Phaseolus vulgaris
Phvul.008G062000 5.0kb upstream 5.0kb upstream 13293 true Chr08: 5605466-5618758 Phaseolus vulgaris
Phvul.008G062000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 5605466-5610465 Phaseolus vulgaris
Phvul.008G062000 5.0kb downstream 5.0kb downstream 13293 true Chr08: 5610466-5623758 Phaseolus vulgaris
Phvul.008G062000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 5618759-5623758 Phaseolus vulgaris
Phvul.008G062000 10.0kb upstream 10.0kb upstream 18293 true Chr08: 5600466-5618758 Phaseolus vulgaris
Phvul.008G062000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 5600466-5610465 Phaseolus vulgaris
Phvul.008G062000 10.0kb downstream 10.0kb downstream 18293 true Chr08: 5610466-5628758 Phaseolus vulgaris
Phvul.008G062000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 5618759-5628758 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041112 5273 Angiosperm View MSA
122312813 5265 Fabidae View MSA
124072135 5270 Rosid View MSA
123751098 5271 Pentapetalae View MSA
122789409 5272 Eudicot View MSA
121347198 5274 Embryophyte View MSA
123426227 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.22244 0.0 12.6114    
cufflinks 2.02564 0.0 14.7337    
cufflinks 4.91089 0.0 26.1727   High
cufflinks 0.594047 0.0 2.61087   Low
cufflinks 2.06964 0.0 12.5379    
cufflinks 3.57558 0.0 17.7944    
cufflinks 2.29834 0.0 15.847    
cufflinks 2.2683 0.0 14.9144    
cufflinks 1.59553 0.0 8.91804    
cufflinks 3.29889 0.0 23.3376    
cufflinks 1.51133 0.0 8.85466    

0 Strain