Gene : Phvul.008G054300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31126:SF19 - ATYPICAL DUAL-SPECIFICITY PHOSPHATASE Genomic Order:  564
Name:  ? Phvul.008G054300 Secondary Identifier:  ? PAC:37161431
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G054300 0.5kb upstream 0.5kb upstream 2719 true Chr08: 4844489-4847207 Phaseolus vulgaris
Phvul.008G054300 0.5kb upstream 0.5kb upstream 500 false Chr08: 4846708-4847207 Phaseolus vulgaris
Phvul.008G054300 0.5kb downstream 0.5kb downstream 2719 true Chr08: 4843989-4846707 Phaseolus vulgaris
Phvul.008G054300 0.5kb downstream 0.5kb downstream 500 false Chr08: 4843989-4844488 Phaseolus vulgaris
Phvul.008G054300 1.0kb upstream 1.0kb upstream 3219 true Chr08: 4844489-4847707 Phaseolus vulgaris
Phvul.008G054300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 4846708-4847707 Phaseolus vulgaris
Phvul.008G054300 1.0kb downstream 1.0kb downstream 3219 true Chr08: 4843489-4846707 Phaseolus vulgaris
Phvul.008G054300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 4843489-4844488 Phaseolus vulgaris
Phvul.008G054300 2.0kb upstream 2.0kb upstream 4219 true Chr08: 4844489-4848707 Phaseolus vulgaris
Phvul.008G054300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 4846708-4848707 Phaseolus vulgaris
Phvul.008G054300 2.0kb downstream 2.0kb downstream 4219 true Chr08: 4842489-4846707 Phaseolus vulgaris
Phvul.008G054300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 4842489-4844488 Phaseolus vulgaris
Phvul.008G054300 5.0kb upstream 5.0kb upstream 7219 true Chr08: 4844489-4851707 Phaseolus vulgaris
Phvul.008G054300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 4846708-4851707 Phaseolus vulgaris
Phvul.008G054300 5.0kb downstream 5.0kb downstream 7219 true Chr08: 4839489-4846707 Phaseolus vulgaris
Phvul.008G054300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 4839489-4844488 Phaseolus vulgaris
Phvul.008G054300 10.0kb upstream 10.0kb upstream 12219 true Chr08: 4844489-4856707 Phaseolus vulgaris
Phvul.008G054300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 4846708-4856707 Phaseolus vulgaris
Phvul.008G054300 10.0kb downstream 10.0kb downstream 12219 true Chr08: 4834489-4846707 Phaseolus vulgaris
Phvul.008G054300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 4834489-4844488 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308202 5265 Fabidae View MSA
124069205 5270 Rosid View MSA
123742973 5271 Pentapetalae View MSA
122795531 5272 Eudicot View MSA
122050938 5273 Angiosperm View MSA
121344841 5274 Embryophyte View MSA
123380112 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 54.5321 0.0 141.002 High High
cufflinks 12.2479 0.0 35.0312    
cufflinks 11.2209 0.0 32.4319    
cufflinks 16.7866 0.0 46.4972    
cufflinks 7.71498 0.0 23.2033   Low
cufflinks 11.5664 0.0 33.2636    
cufflinks 22.8182 0.0 61.4825    
cufflinks 15.5795 0.0 43.418    
cufflinks 17.2079 0.0 47.5591    
cufflinks 8.89447 0.0 26.3075    
cufflinks 9.93488 0.0 29.0156    

0 Strain