Gene : Phvul.008G057300 P. vulgaris v2.1
Defline:  (1 of 3) PTHR10994:SF70 - RETICULON-LIKE PROTEIN B4 Genomic Order:  594
Name:  ? Phvul.008G057300 Secondary Identifier:  ? PAC:37157685
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G057300 0.5kb upstream 0.5kb upstream 2814 true Chr08: 5095752-5098565 Phaseolus vulgaris
Phvul.008G057300 0.5kb upstream 0.5kb upstream 500 false Chr08: 5095752-5096251 Phaseolus vulgaris
Phvul.008G057300 0.5kb downstream 0.5kb downstream 2814 true Chr08: 5096252-5099065 Phaseolus vulgaris
Phvul.008G057300 0.5kb downstream 0.5kb downstream 500 false Chr08: 5098566-5099065 Phaseolus vulgaris
Phvul.008G057300 1.0kb upstream 1.0kb upstream 3314 true Chr08: 5095252-5098565 Phaseolus vulgaris
Phvul.008G057300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 5095252-5096251 Phaseolus vulgaris
Phvul.008G057300 1.0kb downstream 1.0kb downstream 3314 true Chr08: 5096252-5099565 Phaseolus vulgaris
Phvul.008G057300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 5098566-5099565 Phaseolus vulgaris
Phvul.008G057300 2.0kb upstream 2.0kb upstream 4314 true Chr08: 5094252-5098565 Phaseolus vulgaris
Phvul.008G057300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 5094252-5096251 Phaseolus vulgaris
Phvul.008G057300 2.0kb downstream 2.0kb downstream 4314 true Chr08: 5096252-5100565 Phaseolus vulgaris
Phvul.008G057300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 5098566-5100565 Phaseolus vulgaris
Phvul.008G057300 5.0kb upstream 5.0kb upstream 7314 true Chr08: 5091252-5098565 Phaseolus vulgaris
Phvul.008G057300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 5091252-5096251 Phaseolus vulgaris
Phvul.008G057300 5.0kb downstream 5.0kb downstream 7314 true Chr08: 5096252-5103565 Phaseolus vulgaris
Phvul.008G057300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 5098566-5103565 Phaseolus vulgaris
Phvul.008G057300 10.0kb upstream 10.0kb upstream 12314 true Chr08: 5086252-5098565 Phaseolus vulgaris
Phvul.008G057300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 5086252-5096251 Phaseolus vulgaris
Phvul.008G057300 10.0kb downstream 10.0kb downstream 12314 true Chr08: 5096252-5108565 Phaseolus vulgaris
Phvul.008G057300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 5098566-5108565 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312395 5265 Fabidae View MSA
124069227 5270 Rosid View MSA
123749221 5271 Pentapetalae View MSA
122790829 5272 Eudicot View MSA
122049511 5273 Angiosperm View MSA
123429002 5275 Viridiplantae View MSA
121351639 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.2512 0.0 81.6781   Low
cufflinks 67.418 0.0 193.949 High  
cufflinks 52.0829 0.0 146.366 High  
cufflinks 86.0427 0.0 256.133 High  
cufflinks 134.279 0.0 505.238 High High
cufflinks 37.3202 0.0 121.607 High  
cufflinks 37.6532 0.0 105.181 High  
cufflinks 48.2914 0.0 157.404 High  
cufflinks 46.7319 0.0 130.768 High  
cufflinks 51.509 0.0 145.248 High  
cufflinks 104.874 0.0 325.344 High High

0 Strain