Gene : Phvul.008G053600 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11802//PTHR11802:SF102 - SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE // SUBFAMILY NOT NAMED Genomic Order:  554
Name:  ? Phvul.008G053600 Secondary Identifier:  ? PAC:37160333
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G053600 0.5kb upstream 0.5kb upstream 5997 true Chr08: 4754591-4760587 Phaseolus vulgaris
Phvul.008G053600 0.5kb upstream 0.5kb upstream 500 false Chr08: 4754591-4755090 Phaseolus vulgaris
Phvul.008G053600 0.5kb downstream 0.5kb downstream 5997 true Chr08: 4755091-4761087 Phaseolus vulgaris
Phvul.008G053600 0.5kb downstream 0.5kb downstream 500 false Chr08: 4760588-4761087 Phaseolus vulgaris
Phvul.008G053600 1.0kb upstream 1.0kb upstream 6497 true Chr08: 4754091-4760587 Phaseolus vulgaris
Phvul.008G053600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 4754091-4755090 Phaseolus vulgaris
Phvul.008G053600 1.0kb downstream 1.0kb downstream 6497 true Chr08: 4755091-4761587 Phaseolus vulgaris
Phvul.008G053600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 4760588-4761587 Phaseolus vulgaris
Phvul.008G053600 2.0kb upstream 2.0kb upstream 7497 true Chr08: 4753091-4760587 Phaseolus vulgaris
Phvul.008G053600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 4753091-4755090 Phaseolus vulgaris
Phvul.008G053600 2.0kb downstream 2.0kb downstream 7497 true Chr08: 4755091-4762587 Phaseolus vulgaris
Phvul.008G053600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 4760588-4762587 Phaseolus vulgaris
Phvul.008G053600 5.0kb upstream 5.0kb upstream 10497 true Chr08: 4750091-4760587 Phaseolus vulgaris
Phvul.008G053600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 4750091-4755090 Phaseolus vulgaris
Phvul.008G053600 5.0kb downstream 5.0kb downstream 10497 true Chr08: 4755091-4765587 Phaseolus vulgaris
Phvul.008G053600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 4760588-4765587 Phaseolus vulgaris
Phvul.008G053600 10.0kb upstream 10.0kb upstream 15497 true Chr08: 4745091-4760587 Phaseolus vulgaris
Phvul.008G053600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 4745091-4755090 Phaseolus vulgaris
Phvul.008G053600 10.0kb downstream 10.0kb downstream 15497 true Chr08: 4755091-4770587 Phaseolus vulgaris
Phvul.008G053600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 4760588-4770587 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041261 5273 Angiosperm View MSA
122303028 5265 Fabidae View MSA
124075112 5270 Rosid View MSA
123744248 5271 Pentapetalae View MSA
122789110 5272 Eudicot View MSA
121344496 5274 Embryophyte View MSA
123428424 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.4806 0.0 45.2701    
cufflinks 36.3739 0.0 95.3193 High  
cufflinks 51.5017 0.0 138.29 High High
cufflinks 14.8188 0.0 38.5995    
cufflinks 10.5669 0.0 28.0397    
cufflinks 42.5863 0.0 112.735 High  
cufflinks 34.0546 0.0 89.0108 High  
cufflinks 42.9373 0.0 113.923 High  
cufflinks 15.4415 0.0 40.0767    
cufflinks 4.96475 0.0 13.9902   Low
cufflinks 19.113 0.0 49.4478    

0 Strain